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This paper is about similarity between objects that can be represented as points in metric measure spaces. A metric measure space is a metric space that is also equipped with a measure. For example, a network with distances between its…

Discrete Mathematics · Computer Science 2020-11-03 Evgeny Dantsin , Alexander Wolpert

Distances on merge trees facilitate visual comparison of collections of scalar fields. Two desirable properties for these distances to exhibit are 1) the ability to discern between scalar fields which other, less complex topological…

Computational Geometry · Computer Science 2022-10-18 Brian Bollen , Pasindu Tennakoon , Joshua A. Levine

Graphs are used in almost every scientific discipline to express relations among a set of objects. Algorithms that compare graphs, and output a closeness score, or a correspondence among their nodes, are thus extremely important. Despite…

Discrete Mathematics · Computer Science 2020-11-17 Sam Safavi , José Bento

Given a collection of points in R^3, KD-Tree and R-Tree are well-known nearest neighbor search (NNS) algorithms that rely on space partitioning and spatial indexing techniques. However, when the query point is far from the data points or…

Computational Geometry · Computer Science 2025-07-30 Pengfei Wang , Jiantao Song , Shiqing Xin , Shuangmin Chen , Changhe Tu , Wenping Wang , Jiaye Wang

We introduce a semiparametric approach to neighbor-based classification. We build off the recently proposed Boundary Trees algorithm by Mathy et al.(2015) which enables fast neighbor-based classification, regression and retrieval in large…

Machine Learning · Computer Science 2018-10-29 Tharindu Adikari , Stark C. Draper

Geometric graphs appear in many real-world data sets, such as road networks, sensor networks, and molecules. We investigate the notion of distance between embedded graphs and present a metric to measure the distance between two geometric…

Data Structures and Algorithms · Computer Science 2024-07-15 Erin Wolf Chambers , Elizabeth Munch , Sarah Percival , Xinyi Wang

The M-tree is a paged, dynamically balanced metric access method that responds gracefully to the insertion of new objects. To date, no algorithm has been published for the corresponding Delete operation. We believe this to be non-trivial…

Databases · Computer Science 2010-04-27 Alan P. Sexton , Richard Swinbank

Dense high dimensional vectors are becoming increasingly vital in fields such as computer vision, machine learning, and large language models (LLMs), serving as standard representations for multimodal data. Now the dimensionality of these…

Machine Learning · Computer Science 2024-10-10 Zhonghan Chen , Ruiyuan Zhang , Xi Zhao , Xiaojun Cheng , Xiaofang Zhou

The idea of generalized indices is one of the success stories of database systems research. It has found its way to implementation in common database systems. GiST (Generalized Search Tree) and SP-GiST (Space-Partitioned Generalized Search…

Databases · Computer Science 2024-09-16 Maxime Schoemans , Walid G. Aref , Esteban Zimányi , Mahmoud Sakr

Metric embedding has become a common technique in the design of algorithms. Its applicability is often dependent on how high the embedding's distortion is. For example, embedding finite metric space into trees may require linear distortion…

Data Structures and Algorithms · Computer Science 2007-05-23 Yair Bartal , Manor Mendel

Topological structures such as the merge tree provide an abstract and succinct representation of scalar fields. They facilitate effective visualization and interactive exploration of feature-rich data. A merge tree captures the topology of…

Computational Geometry · Computer Science 2024-06-06 Raghavendra Sridharamurthy , Talha Bin Masood , Adhitya Kamakshidasan , Vijay Natarajan

SpectralNet is a graph clustering method that uses neural network to find an embedding that separates the data. So far it was only used with $k$-nn graphs, which are usually constructed using a distance metric (e.g., Euclidean distance).…

Machine Learning · Computer Science 2023-02-28 Mashaan Alshammari , John Stavrakakis , Adel F. Ahmed , Masahiro Takatsuka

Efficient spatial indexing is crucial for processing large-scale spatial data. Traditional spatial indexes, such as STR-Tree and Quad-Tree, organize spatial objects based on coarse approximations, such as their minimum bounding rectangles…

Databases · Computer Science 2026-03-10 Xiangyang Yang , Xuefeng Guan , Lanxue Dang , Yi Xie , Qingyang Xu , Huayi Wu , Jiayao Wang

We present a new approach to approximate nearest-neighbor queries in fixed dimension under a variety of non-Euclidean distances. We are given a set $S$ of $n$ points in $\mathbb{R}^d$, an approximation parameter $\varepsilon > 0$, and a…

Computational Geometry · Computer Science 2023-06-28 Ahmed Abdelkader , Sunil Arya , Guilherme D. da Fonseca , David M. Mount

The main contribution of this dissertation is the introduction of new or improved approximation algorithms and data structures for several similarity search problems. We examine the furthest neighbor query, the annulus query, distance…

Data Structures and Algorithms · Computer Science 2019-06-13 Johan von Tangen Sivertsen

We study the problem of finding the $k$ most similar trajectories to a given query trajectory. Our work is inspired by the work of Grossi et al. [6] that considers trajectories as walks in a graph. Each visited vertex is accompanied by a…

Data Structures and Algorithms · Computer Science 2020-10-20 Lutz Oettershagen , Anne Driemel , Petra Mutzel

Fitting distances to tree metrics and ultrametrics are two widely used methods in hierarchical clustering, primarily explored within the context of numerical taxonomy. Given a positive distance function…

Data Structures and Algorithms · Computer Science 2025-04-25 Amir Carmel , Debarati Das , Evangelos Kipouridis , Evangelos Pipis

The metric dimension of a graph is the smallest number of nodes required to identify all other nodes based on shortest path distances uniquely. Applications of metric dimension include discovering the source of a spread in a network,…

Combinatorics · Mathematics 2021-04-16 Richard C. Tillquist , Rafael M. Frongillo , Manuel E. Lladser

Feature subset selection, as a special case of the general subset selection problem, has been the topic of a considerable number of studies due to the growing importance of data-mining applications. In the feature subset selection problem…

Machine Learning · Computer Science 2014-11-13 Tofigh Naghibi , Sarah Hoffmann , Beat Pfister

In this paper, we address a similarity search problem for spatial trajectories in road networks. In particular, we focus on the subtrajectory similarity search problem, which involves finding in a database the subtrajectories similar to a…

Databases · Computer Science 2020-07-13 Satoshi Koide , Chuan Xiao , Yoshiharu Ishikawa