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The Shortest Common Supersequence problem (SCS for short) consists in finding a shortest common supersequence of a finite set of words on a fixed alphabet Sigma. It is well-known that its decision version denoted [SR8] in [Garey and…

Discrete Mathematics · Computer Science 2015-01-09 Aurélie Lagoutte , Sébastien Tavenas

We present an algorithm for approximating the edit distance between two strings of length $n$ in time $n^{1+\varepsilon}$ up to a constant factor, for any $\varepsilon>0$. Our result completes a research direction set forth in the recent…

Data Structures and Algorithms · Computer Science 2022-07-18 Alexandr Andoni , Negev Shekel Nosatzki

Cyclic codes are among the most important families of codes in coding theory for both theoretical and practical reasons. Despite their prominence and intensive research on cyclic codes for over a half century, there are still open problems…

Information Theory · Computer Science 2021-07-02 Nuh Aydin , R. Oliver VandenBerg

A repetition free Longest Common Subsequence (LCS) of two sequences x and y is an LCS of x and y where each symbol may appear at most once. Let R denote the length of a repetition free LCS of two sequences of n symbols each one chosen…

Combinatorics · Mathematics 2013-05-22 Marcos Kiwi , Cristina G. Fernandes

Let $s$ be a finite sequence over a field of length $n$. It is well-known that if $s$ satisfies a linear recurrence of order $d$ with non-zero constant term, then the reverse of $s$ also satisfies a recurrence of order $d$ (with…

Information Theory · Computer Science 2010-07-26 Graham H. Norton

Palindromes are important objects in strings which have been extensively studied from combinatorial, algorithmic, and bioinformatics points of views. It is known that the length of the longest palindromic substrings (LPSs) of a given string…

Data Structures and Algorithms · Computer Science 2021-01-11 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

A number of recent papers -- e.g. Brandt et al. (STOC 2016), Chang et al. (FOCS 2016), Ghaffari & Su (SODA 2017), Brandt et al. (PODC 2017), and Chang & Pettie (FOCS 2017) -- have advanced our understanding of one of the most fundamental…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-06 Alkida Balliu , Juho Hirvonen , Janne H. Korhonen , Tuomo Lempiäinen , Dennis Olivetti , Jukka Suomela

In the Shortest-Superstring problem, we are given a set of strings S and want to find a string that contains all strings in S as substrings and has minimum length. This is a classical problem in approximation and the best known…

Data Structures and Algorithms · Computer Science 2016-11-11 Marcin Mucha

In the classical longest palindromic substring (LPS) problem, we are given a string $S$ of length $n$, and the task is to output a longest palindromic substring in $S$. Gilbert, Hajiaghayi, Saleh, and Seddighin [SPAA 2023] showed how to…

Data Structures and Algorithms · Computer Science 2025-11-18 Solon P. Pissis

In this paper, we prove that the general CNF satisfiability problem can be solved in $O^*(1.0638^L)$ time, where $L$ is the length of the input CNF-formula (i.e., the total number of literals in the formula), which improves the previous…

Data Structures and Algorithms · Computer Science 2022-08-18 Junqiang Peng , Mingyu Xiao

A string is said to be closed if its length is one, or if it has a non-empty factor that occurs both as a prefix and as a suffix of the string, but does not occur elsewhere. The notion of closed words was introduced by [Fici, WORDS 2011].…

Data Structures and Algorithms · Computer Science 2024-10-01 Takuya Mieno , Shun Takahashi , Kazuhisa Seto , Takashi Horiyama

We present an efficient algorithm for computing the LZ78 factorization of a text, where the text is represented as a straight line program (SLP), which is a context free grammar in the Chomsky normal form that generates a single string.…

Data Structures and Algorithms · Computer Science 2013-05-27 Hideo Bannai , Shunsuke Inenaga , Masayuki Takeda

We present a simple and fast algorithm for computing the $N$-th term of a given linearly recurrent sequence. Our new algorithm uses $O(\mathsf{M}(d) \log N)$ arithmetic operations, where $d$ is the order of the recurrence, and…

Symbolic Computation · Computer Science 2020-08-21 Alin Bostan , Ryuhei Mori

We present a randomized approximation algorithm for computing traveling salesperson tours in undirected regular graphs. Given an $n$-vertex, $k$-regular graph, the algorithm computes a tour of length at most $\left(1+\frac{7}{\ln…

Data Structures and Algorithms · Computer Science 2014-06-16 Ashish Chiplunkar , Sundar Vishwanathan

In this paper we initiate the study of computing a maximal (not necessarily maximum) repeating pattern in a single input string, where the corresponding problems have been studied (e.g., a maximal common subsequence) only in two or more…

Data Structures and Algorithms · Computer Science 2026-01-21 Mingyang Gong , Adiesha Liyanage , Braeden Sopp , Binhai Zhu

We provide a general framework for getting expected linear time constant factor approximations (and in many cases FPTASs) to several well-known problems in Computational Geometry, such as $k$-center clustering and farthest nearest neighbor.…

Computational Geometry · Computer Science 2026-03-04 Sariel Har-Peled , Banjamin Raichel

Palindromes are strings that read the same forward and backward. Problems of computing palindromic structures in strings have been studied for many years with a motivation of their application to biology. The longest palindrome problem is…

Data Structures and Algorithms · Computer Science 2023-06-21 Kazuki Mitani , Takuya Mieno , Kazuhisa Seto , Takashi Horiyama

One of the most important and challenging problems in coding theory is to determine the optimal values of the parameters of a linear code and to explicitly construct codes with optimal parameters, or as close to the optimal values as…

Information Theory · Computer Science 2021-06-25 Nuh Aydin , Thomas Guidotti , Peihan Liu

The factor complexity ${\mathcal C}_{\mathbf u}$ of a sequence ${\mathbf u} = u_0u_1u_2 \cdots$ over a finite alphabet counts the number of factors of length $n$ occurring in $\mathbf u$, i.e., ${\mathcal C}_{\mathbf u}(n) = \#{\mathcal…

Combinatorics · Mathematics 2025-11-18 Lubomíra Dvořáková , Edita Pelantová

The problem of the fluctuation of the Longest Common Subsequence (LCS) of two i.i.d. sequences of length $n>0$ has been open for decades. There exist contradicting conjectures on the topic. Chvatal and Sankoff conjectured in 1975 that…

Probability · Mathematics 2010-11-15 Heinrich Matzinger , Felipe Torres