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The genetic code has been shown to be very error robust compared to randomly selected codes, but to be significantly less error robust than a certain code found by a heuristic algorithm. We formulate this optimisation problem as a Quadratic…

Quantitative Methods · Quantitative Biology 2015-03-13 Harry Buhrman , Peter T. S. van der Gulik , Steven M. Kelk , Wouter M. Koolen , Leen Stougie

In land surveying, the generation of maps was greatly simplified with the introduction of orthophotos and at a later stage with airborne LiDAR laser scanning systems. While the original purpose of LiDAR systems was to determine the altitude…

Neural and Evolutionary Computing · Computer Science 2014-01-21 Ronald Hochreiter , Christoph Waldhauser

Generic programming is an effective methodology for developing reusable software libraries. Many programming languages provide generics and have features for describing interfaces, but none completely support the idioms used in generic…

Programming Languages · Computer Science 2007-08-17 Jeremy G. Siek , Andrew Lumsdaine

An approach to evolutionary ensemble learning for classification is proposed in which boosting is used to construct a stack of programs. Each application of boosting identifies a single champion and a residual dataset, i.e. the training…

Neural and Evolutionary Computing · Computer Science 2023-11-27 Zhilei Zhou , Ziyu Qiu , Brad Niblett , Andrew Johnston , Jeffrey Schwartzentruber , Nur Zincir-Heywood , Malcolm Heywood

This paper introduces Gene-Machine, an efficient and new search heuristic algorithm, based in the building-block hypothesis. It is inspired by natural evolution, but does not use some of the concepts present in genetic algorithms like…

Neural and Evolutionary Computing · Computer Science 2015-03-13 Alfredo Garcia Woods

Generative models for source code are an interesting structured prediction problem, requiring to reason about both hard syntactic and semantic constraints as well as about natural, likely programs. We present a novel model for this problem…

Machine Learning · Computer Science 2019-04-18 Marc Brockschmidt , Miltiadis Allamanis , Alexander L. Gaunt , Oleksandr Polozov

Developing and maintaining life requires a lot of computation. This is done by gene regulatory networks. But we have little understanding of how this computation is organized. I show that there is a direct correspondence between the…

Molecular Networks · Quantitative Biology 2022-09-01 Thomas M. A. Fink

Programming is about automation in a wide variety of domains. Developing itself is one of those. As a side-effect, progress in automated coding may make people less willing to learn computer programming. This could become an issue, if the…

Programming Languages · Computer Science 2026-05-01 Attila Egri-Nagy

Structured evolutionary algorithms have been investigated for some time. However, they have been under-explored specially in the field of multi-objective optimization. Despite their good results, the use of complex dynamics and structures…

Neural and Evolutionary Computing · Computer Science 2019-01-03 Danilo Vasconcellos Vargas , Junichi Murata , Hirotaka Takano , Alexandre Claudio Botazzo Delbem

Recently, researchers have applied genetic algorithms (GAs) to address some problems in quantum computation. Also, there has been some works in the designing of genetic algorithms based on quantum theoretical concepts and techniques. The so…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Gilson A. Giraldi , Renato Portugal , Ricardo N. Thess

Existing large language model-based code generation pipelines typically use beam search or sampling algorithms during the decoding process. Although the programs they generate achieve high token-matching-based scores, they often fail to…

Machine Learning · Computer Science 2023-03-10 Shun Zhang , Zhenfang Chen , Yikang Shen , Mingyu Ding , Joshua B. Tenenbaum , Chuang Gan

A first step in exploring population structure in crop plants and other organisms is to define the number of subpopulations that exist for a given data set. The genetic marker data sets being generated have become increasingly large over…

Applications · Statistics 2014-01-09 Mark A. Newell , Dianne Cook , Heike Hofmann , Jean-Luc Jannink

A new model for evolving Evolutionary Algorithms (EAs) is proposed in this paper. The model is based on the Multi Expression Programming (MEP) technique. Each MEP chromosome encodes an evolutionary pattern that is repeatedly used for…

Neural and Evolutionary Computing · Computer Science 2021-10-13 Mihai Oltean

What does it mean to claim that a physical or natural system computes? One answer, endorsed here, is that computing is about programming a system to behave in different ways. This paper offers an account of what it means for a physical…

Information Theory · Computer Science 2013-06-18 Hector Zenil

Complex systems with tightly coadapted parts frequently appear in living systems and are difficult to account for through Darwinian evolution, that is random variation and natural selection, if the constituent parts are independently coded…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 John F. McGowan , Ph. D

Computer programming is undergoing a true transformation driven by powerful new tools for automatic source code generation based on large language models. This transformation is also manifesting in introductory programming courses at…

Computers and Society · Computer Science 2025-07-02 Clemente Rubio-Manzano , Jazna Meza , Rodolfo Fernandez-Santibanez , Christian Vidal-Castro

This paper presents a new type of genetic algorithm for the set covering problem. It differs from previous evolutionary approaches first because it is an indirect algorithm, i.e. the actual solutions are found by an external decoder…

Neural and Evolutionary Computing · Computer Science 2010-07-05 Uwe Aickelin

The potential benefit of migrating software design from Structured to Object Oriented Paradigm is manifolded including modularity, manageability and extendability. This design migration should be automated as it will reduce the time…

Software Engineering · Computer Science 2018-01-04 Md. Selim , Saeed Siddik , Alim Ul Gias , M. Abdullah-Al-Wadud , Shah Mostafa Khaled

The genetic code structure into distinct multiplet-classes as well as the numeric degeneracies of the latter are revealed by a two-step process. First, an empirical inventory of the degeneracies (of the shuffled multiplets) in two specific…

Other Quantitative Biology · Quantitative Biology 2009-11-13 Tidjani Negadi

Symbolic regression is the process of identifying mathematical expressions that fit observed output from a black-box process. It is a discrete optimization problem generally believed to be NP-hard. Prior approaches to solving the problem…

Neural and Evolutionary Computing · Computer Science 2021-11-19 T. Nathan Mundhenk , Mikel Landajuela , Ruben Glatt , Claudio P. Santiago , Daniel M. Faissol , Brenden K. Petersen