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Related papers: GeNet: Deep Representations for Metagenomics

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Deep Neural Networks (DNNs), with its promising performance, are being increasingly used in safety critical applications such as autonomous driving, cancer detection, and secure authentication. With growing importance in deep learning,…

Machine Learning · Computer Science 2019-11-19 Senthil Mani , Anush Sankaran , Srikanth Tamilselvam , Akshay Sethi

The gesture recognition using motion capture data and depth sensors has recently drawn more attention in vision recognition. Currently most systems only classify dataset with a couple of dozens different actions. Moreover, feature…

Computer Vision and Pattern Recognition · Computer Science 2014-09-02 Kyunghyun Cho , Xi Chen

This paper presents HeNet, a hierarchical ensemble neural network, applied to classify hardware-generated control flow traces for malware detection. Deep learning-based malware detection has so far focused on analyzing executable files and…

Cryptography and Security · Computer Science 2018-01-09 Li Chen , Salmin Sultana , Ravi Sahita

Deep neural networks (DNNs) have been used to create models for many complex analysis problems like image recognition and medical diagnosis. DNNs are a popular tool within machine learning due to their ability to model complex patterns and…

Machine Learning · Computer Science 2024-05-14 Parth Patil , Ben Boardley , Jack Gardner , Emily Loiselle , Deerajkumar Parthipan

In this work, we introduce a self-supervised feature representation learning framework DreamTeacher that utilizes generative networks for pre-training downstream image backbones. We propose to distill knowledge from a trained generative…

Computer Vision and Pattern Recognition · Computer Science 2023-07-17 Daiqing Li , Huan Ling , Amlan Kar , David Acuna , Seung Wook Kim , Karsten Kreis , Antonio Torralba , Sanja Fidler

In this paper, a novel strategy of Secure Steganograpy based on Generative Adversarial Networks is proposed to generate suitable and secure covers for steganography. The proposed architecture has one generative network, and two…

Computer Vision and Pattern Recognition · Computer Science 2018-11-27 Haichao Shi , Jing Dong , Wei Wang , Yinlong Qian , Xiaoyu Zhang

Deep learning has been widely used for protein engineering. However, it is limited by the lack of sufficient experimental data to train an accurate model for predicting the functional fitness of high-order mutants. Here, we develop SESNet,…

Quantitative Methods · Quantitative Biology 2023-04-10 Mingchen Li , Liqi Kang , Yi Xiong , Yu Guang Wang , Guisheng Fan , Pan Tan , Liang Hong

The rapid advancement of deep learning in medical image analysis has greatly enhanced the accuracy of skin cancer classification. However, current state-of-the-art models, especially those based on transfer learning like ResNet50, come with…

Image and Video Processing · Electrical Eng. & Systems 2025-05-29 Abdullah Al Mamun , Pollob Chandra Ray , Md Rahat Ul Nasib , Akash Das , Jia Uddin , Md Nurul Absur

This work proves that semantic segmentation on minimally invasive surgical instruments can be improved by using training data that has been augmented through domain adaptation. The benefit of this method is twofold. Firstly, it suppresses…

Computer Vision and Pattern Recognition · Computer Science 2020-06-08 Iñigo Azqueta-Gavaldon , Florian Fröhlich , Klaus Strobl , Rudolph Triebel

Metagenomic disease prediction commonly relies on species abundance tables derived from large, incomplete reference catalogs, constraining resolution and discarding valuable information contained in DNA reads. To overcome these limitations,…

Genomics · Quantitative Biology 2026-01-08 Gaspar Roy , Eugeni Belda , Baptiste Hennecart , Yann Chevaleyre , Edi Prifti , Jean-Daniel Zucker

With the development of large language models (LLMs), zero-shot learning has attracted much attention for various NLP tasks. Different from prior works that generate training data with billion-scale natural language generation (NLG) models,…

Computation and Language · Computer Science 2023-05-19 Yue Yu , Yuchen Zhuang , Rongzhi Zhang , Yu Meng , Jiaming Shen , Chao Zhang

For the past few years, in the race between image steganography and steganalysis, deep learning has emerged as a very promising alternative to steganalyzer approaches based on rich image models combined with ensemble classifiers. A key…

Multimedia · Computer Science 2016-08-02 Jean-François Couchot , Raphaël Couturier , Christophe Guyeux , Michel Salomon

The recent development of metagenomic sequencing makes it possible to sequence microbial genomes including viruses in an environmental sample. Identifying viral sequences from metagenomic data is critical for downstream virus analyses. The…

Genomics · Quantitative Biology 2018-06-21 Jie Ren , Kai Song , Chao Deng , Nathan A. Ahlgren , Jed A. Fuhrman , Yi Li , Xiaohui Xie , Fengzhu Sun

The use of deep learning (DL) in medical image analysis has significantly improved the ability to predict lung cancer. In this study, we introduce a novel deep convolutional neural network (CNN) model, named ResNet+, which is based on the…

Image and Video Processing · Electrical Eng. & Systems 2025-07-03 Ahmad Chaddad , Jihao Peng , Yihang Wu

Genome sequencing is the basis for many modern biological and medicinal studies. With recent technological advances, metagenomics has become a problem of interest. This problem entails the analysis and reconstruction of multiple DNA…

Probability · Mathematics 2022-01-14 Marlee Herring

Breast cancer is one of the most common and dangerous cancers in women, while it can also afflict men. Breast cancer treatment and detection are greatly aided by the use of histopathological images since they contain sufficient phenotypic…

Image and Video Processing · Electrical Eng. & Systems 2023-04-12 Md Ishtyaq Mahmud , Muntasir Mamun , Ahmed Abdelgawad

The use of accurate scanning transmission electron microscopy (STEM) image simulation methods require large computation times that can make their use infeasible for the simulation of many images. Other simulation methods based on linear…

Computer Vision and Pattern Recognition · Computer Science 2022-11-18 Nick Lawrence , Mingren Shen , Ruiqi Yin , Cloris Feng , Dane Morgan

Currently, MRI-only radiotherapy (RT) eliminates some of the concerns about using CT images in RT chains such as the registration of MR images to a separate CT, extra dose delivery, and the additional cost of repeated imaging. However, one…

Medical Physics · Physics 2021-03-03 Faeze Gholamiankhah , Samaneh Mostafapour , Hossein Arabi

We present a new "learning-to-learn"-type approach that enables rapid learning of concepts from small-to-medium sized training sets and is primarily designed for web-initialized image retrieval. At the core of our approach is a deep…

Computer Vision and Pattern Recognition · Computer Science 2017-10-30 A. Vakhitov , A. Kuzmin , V. Lempitsky

Generative Adversarial Networks (GANs) have proven to exhibit remarkable performance and are widely used across many generative computer vision applications. However, the unprecedented demand for the deployment of GANs on…

Computer Vision and Pattern Recognition · Computer Science 2024-03-14 Aman Kumar , Khushboo Anand , Shubham Mandloi , Ashutosh Mishra , Avinash Thakur , Neeraj Kasera , Prathosh A P