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We revisit the complexity of approximate pattern matching in an elastic-degenerate string. Such a string is a sequence of $n$ finite sets of strings of total length $N$, and compactly describes a collection of strings obtained by first…

Data Structures and Algorithms · Computer Science 2025-03-04 Paweł Gawrychowski , Adam Górkiewicz , Pola Marciniak , Solon P. Pissis , Karol Pokorski

Detecting all the strings that occur in a text more frequently or less frequently than expected according to an IID or a Markov model is a basic problem in string mining, yet current algorithms are based on data structures that are either…

Data Structures and Algorithms · Computer Science 2015-08-13 Djamal Belazzougui , Fabio Cunial

Detecting anomalies in Internet of Things (IoT) networks is a critical security challenge, often hampered by highly imbalanced and diverse network traffic datasets. Standard classifiers struggle to perform well across all traffic types.…

Networking and Internet Architecture · Computer Science 2026-05-20 Hossein Shaemi Barzoki , Amir Hossein Fathi Hafshejani , Ahmadreza Montazerolghaem

Approximate string matching is the problem of finding all factors of a text t of length n that are at a distance at most k from a pattern x of length m. Approximate circular string matching is the problem of finding all factors of t that…

Data Structures and Algorithms · Computer Science 2016-04-26 Carl Barton , Costas S. Iliopoulos , Solon P. Pissis

The problem of approximate string matching is important in many different areas such as computational biology, text processing and pattern recognition. A great effort has been made to design efficient algorithms addressing several variants…

Data Structures and Algorithms · Computer Science 2008-07-29 Dimitris Papamichail , Georgios Papamichail

Given a pattern string $P$ of length $n$ consisting of $\delta$ distinct characters and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet $\Sigma$ of size $\Delta$, the {\em exact string…

Data Structures and Algorithms · Computer Science 2015-12-14 Srikrishnan Divakaran

This paper presents an efficient algorithm for retrieving from a database of trees, all trees that match a given query tree approximately, that is, within a certain error tolerance. It has natural language processing applications in…

cmp-lg · Computer Science 2008-02-03 Kemal Oflazer

In this paper, we consider the problem of identifying patterns of interest in colored strings. A colored string is a string where each position is assigned one of a finite set of colors. Our task is to find substrings of the colored string…

Data Structures and Algorithms · Computer Science 2024-04-16 Zsuzsanna Lipták , Simon J. Puglisi , Massimiliano Rossi

In this paper we study a variant of string pattern matching which deals with tuples of strings known as \textit{multi-track strings}. Multi-track strings are a generalisation of strings (or \textit{single-track strings}) that have primarily…

Data Structures and Algorithms · Computer Science 2019-12-02 Carl Barton , Ewan Birney , Tomas Fitzgerald

We study the design of efficient algorithms for combinatorial pattern matching. More concretely, we study algorithms for tree matching, string matching, and string matching in compressed texts.

Data Structures and Algorithms · Computer Science 2007-09-03 Philip Bille

The Internet of Things (IoT) is a system that connects physical computing devices, sensors, software, and other technologies. Data can be collected, transferred, and exchanged with other devices over the network without requiring human…

Machine Learning · Computer Science 2023-01-03 Eleonora Achiluzzi , Menglu Li , Md Fahd Al Georgy , Rasha Kashef

In recent years, deep neural networks have had great success in machine learning and pattern recognition. Architecture size for a neural network contributes significantly to the success of any neural network. In this study, we optimize the…

Machine Learning · Computer Science 2021-01-19 Yigit Alparslan , Ethan Jacob Moyer , Isamu Mclean Isozaki , Daniel Schwartz , Adam Dunlop , Shesh Dave , Edward Kim

We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…

Data Structures and Algorithms · Computer Science 2011-10-14 Philip Bille , Inge Li Goertz , Hjalte Wedel Vildhøj , David Kofoed Wind

Motivated by the imminent growth of massive, highly redundant genomic databases, we study the problem of compressing a string database while simultaneously supporting fast random access, substring extraction and pattern matching to the…

Data Structures and Algorithms · Computer Science 2012-11-01 Travis Gagie , Paweł Gawrychowski , Christopher Hoobin , Simon J. Puglisi

Detection of anomalous situations for complex mission-critical systems hold paramount importance when their service continuity needs to be ensured. A major challenge in detecting anomalies from the operational data arises due to the…

Machine Learning · Computer Science 2025-05-20 Shanay Mehta , Shlok Mehendale , Nicole Fernandes , Jyotirmoy Sarkar , Santonu Sarkar , Snehanshu Saha

Searching for all occurrences of a pattern in a text is a fundamental problem in computer science with applications in many other fields, like natural language processing, information retrieval and computational biology. In the last two…

Information Retrieval · Computer Science 2012-10-01 Simone Faro , M. Oguzhan Külekci

Anomaly detection is the process of identifying abnormal instances or events in data sets which deviate from the norm significantly. In this study, we propose a signatures based machine learning algorithm to detect rare or unexpected items…

Computational Finance · Quantitative Finance 2022-02-09 Erdinc Akyildirim , Matteo Gambara , Josef Teichmann , Syang Zhou

The approximate string matching is a fundamental and recurrent problem that arises in most computer science fields. This problem can be defined as follows: Let $D=\{x_1,x_2,\ldots x_d\}$ be a set of $d$ words defined on an alphabet…

Data Structures and Algorithms · Computer Science 2017-01-31 Ibrahim Chegrane

String matching algorithm plays the vital role in the Computational Biology. The functional and structural relationship of the biological sequence is determined by similarities on that sequence. For that, the researcher is supposed to aware…

Data Structures and Algorithms · Computer Science 2014-01-30 Pandiselvam. P , Marimuthu. T , Lawrance. R

Random access schemes are widely used in IoT wireless access networks to accommodate simplicity and power consumption constraints. As a result, the interference arising from overlapping IoT transmissions is a significant issue in such…

Information Theory · Computer Science 2024-10-14 Kosta Dakic , Bassel Al Homssi , Margaret Lech , Akram Al-Hourani