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Functional connectivity (FC) between brain regions tracks symptom severity in many neuropsychiatric disorders. Transcranial magnetic stimulation (TMS) directly alters regional activity and indirectly alters FC. Predicting how FC will change…

Neurons and Cognition · Quantitative Biology 2022-08-25 Andrew C. Murphy , Romain Duprat , Theodore D. Satterthwaite , Desmond J. Oathes , Dani S. Bassett

Working memory (WM), a fundamental cognitive process facilitating the temporary storage, integration, manipulation, and retrieval of information, plays a vital role in reasoning and decision-making tasks. Robust benchmark datasets that…

Neurons and Cognition · Quantitative Biology 2023-11-02 Ankur Sikarwar , Mengmi Zhang

We propose a method for estimating more reproducible functional networks that are more strongly associated with dynamic task activity by using recurrent neural networks with long short term memory (LSTMs). The LSTM model is trained in an…

Quantitative Methods · Quantitative Biology 2021-05-07 Nicha C. Dvornek , Pamela Ventola , James S. Duncan

A synaptic theory of Working Memory (WM) has been developed in the last decade as a possible alternative to the persistent spiking paradigm. In this context, we have developed a neural mass model able to reproduce exactly the dynamics of…

Neurons and Cognition · Quantitative Biology 2025-05-29 Halgurd Taher , Alessandro Torcini , Simona Olmi

Explaining individual differences in cognitive abilities requires both identifying brain parameters that vary across individuals and understanding how brain networks are recruited for specific tasks. Typically, task performance relies on…

Neurons and Cognition · Quantitative Biology 2026-05-05 Sida Chen , Siqi Yang , Zhao Chang , Taro Toyoizumi , Werner Sommer , Lianchun Yu , Qian-Yuan Tang , Changsong Zhou

The vast majority of fMRI studies of task-related brain activity utilize common levels of task demands and analyses that rely on the central tendencies of the data. This approach does not take into account perceived difficulty nor regional…

Neurons and Cognition · Quantitative Biology 2021-10-14 Jason Steffener , Chris Habeck , Dylan Franklin , Meghan Lau , Yara Yakoub , Maryse Gad

Foundation models (FMs) are recognized as a transformative breakthrough that has started to reshape the future of artificial intelligence (AI) across both academia and industry. The integration of FMs into wireless networks is expected to…

Networking and Internet Architecture · Computer Science 2026-01-07 Han Zhang , Mohammad Farzanullah , Mohammad Ghassemi , Akram Bin Sediq , Ali Afana , Melike Erol-Kantarci

Functional connectivity (FC) derived from resting-state fMRI plays a critical role in personalized predictions such as age and cognitive performance. However, applying foundation models(FM) to fMRI data remains challenging due to its high…

Neurons and Cognition · Quantitative Biology 2025-08-26 Yanwen Wang , Xinglin Zhao , Yijin Song , Xiaobo Liu , Yanrong Hao , Rui Cao , Xin Wen

Feed-forward neural networks consist of a sequence of layers, in which each layer performs some processing on the information from the previous layer. A downside to this approach is that each layer (or module, as multiple modules can…

Machine Learning · Computer Science 2020-10-19 Alex Lamb , Anirudh Goyal , Agnieszka Słowik , Michael Mozer , Philippe Beaudoin , Yoshua Bengio

Anatomy of the human brain constrains the formation of large-scale functional networks. Here, given measured brain activity in gray matter, we interpolate these functional signals into the white matter on a structurally-informed…

Neurons and Cognition · Quantitative Biology 2019-08-27 Anjali Tarun , Hamid Behjat , David Abramian , Dimitri Van De Ville

The relationship between brain structure and function has been probed using a variety of approaches, but how the underlying structural connectivity of the human brain drives behavior is far from understood. To investigate the effect of…

Neurons and Cognition · Quantitative Biology 2018-11-15 Kanika Bansal , John D. Medaglia , Danielle S. Bassett , Jean M. Vettel , Sarah F. Muldoon

Wireless foundation models (WFMs) have recently demonstrated promising capabilities, jointly performing multiple wireless functions and adapting effectively to new environments. However, while current WFMs process only one modality,…

Signal Processing · Electrical Eng. & Systems 2026-02-20 Ahmed Aboulfotouh , Hatem Abou-Zeid

Foundation models (FMs) are large neural networks trained on broad datasets, excelling in downstream tasks with minimal fine-tuning. Human activity recognition in video has advanced with FMs, driven by competition among different…

Computer Vision and Pattern Recognition · Computer Science 2024-07-23 Thinesh Thiyakesan Ponbagavathi , Kunyu Peng , Alina Roitberg

At the macroscale, the brain operates as a network of interconnected neuronal populations, which display rhythmic dynamics that support interareal communication. Understanding how stimulation of a particular brain area impacts such…

Neurons and Cognition · Quantitative Biology 2020-11-12 Lia Papadopoulos , Christopher W. Lynn , Demian Battaglia , Danielle S. Bassett

Global brain activity self-organizes into discrete patterns characterized by distinct behavioral observables and modes of information processing. The human thalamocortical system is a densely connected network where local neural activation…

Typical neural networks with external memory do not effectively separate capacity for episodic and working memory as is required for reasoning in humans. Applying knowledge gained from psychological studies, we designed a new model called…

Machine Learning · Computer Science 2018-10-01 T. S. Jayram , Younes Bouhadjar , Ryan L. McAvoy , Tomasz Kornuta , Alexis Asseman , Kamil Rocki , Ahmet S. Ozcan

Humans excel at adapting perceptions and actions to diverse environments, enabling efficient interaction with the external world. This adaptive capability relies on the biological nervous system (BNS), which activates different brain…

Machine Learning · Computer Science 2024-11-12 Jingyao Wang , Huijie Guo , Wenwen Qiang , Jiangmeng Li , Changwen Zheng , Hui Xiong , Gang Hua

Finding an appropriate representation of dynamic activities in the brain is crucial for many downstream applications. Due to its highly dynamic nature, temporally averaged fMRI (functional magnetic resonance imaging) can only provide a…

Machine Learning · Computer Science 2022-08-18 Sikun Lin , Shuyun Tang , Scott Grafton , Ambuj Singh

It has become increasingly popular to study the brain as a network due to the realization that functionality cannot be explained exclusively by independent activation of specialized regions. Instead, across a large spectrum of behaviors,…

Neurons and Cognition · Quantitative Biology 2014-07-22 Petko Bogdanov , Nazli Dereli , Danielle S. Bassett , Scott T. Grafton , Ambuj K. Singh

Multimodal foundation models (MFMs) have demonstrated significant success in tasks such as visual captioning, question answering, and image-text retrieval. However, these models face inherent limitations due to their finite internal…

Computer Vision and Pattern Recognition · Computer Science 2025-02-11 Xingjian Diao , Chunhui Zhang , Weiyi Wu , Zhongyu Ouyang , Peijun Qing , Ming Cheng , Soroush Vosoughi , Jiang Gui
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