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With exquisite precision and reproducibility, cells orchestrate the cooperative action of thousands of nanometer-sized molecular motors to carry out mechanical tasks at much larger length scales, such as cell motility, division and…

Soft Condensed Matter · Physics 2013-01-08 Tim Sanchez , Daniel T. N. Chen , Stephen J. DeCamp , Michael Heymann , Zvonimir Dogic

We study numerically the dynamics of two-dimensional vortex systems at zero temperature. In addition to pinned states and turbulent plastic flow, we find motion of vortices in rough channels along the direction of the driving force. In this…

Condensed Matter · Physics 2009-11-07 Hans Fangohr , Simon J. Cox , Peter A. J. de Groot

Recent studies of pressure-driven flows of dilute polymer solutions in straight channels demonstrated the existence of two-dimensional coherent structures that are disconnected from the laminar state and appear through a sub-critical…

Fluid Dynamics · Physics 2023-03-29 Martin Lellep , Moritz Linkmann , Alexander Morozov

We investigate a two-dimensional network simulator that model the dynamics of two-phase immiscible bulk flow where film flow can be neglected. We present a method for simulating the detailed dynamical process where the two phases are…

Condensed Matter · Physics 2007-05-23 Henning Arendt Knudsen , Eyvind Aker , Alex Hansen

Active nematic systems consist of rod-like internally driven subunits that interact with one another to form large-scale coherent flows. They are important examples of far-from-equilibrium fluids, which exhibit a wealth of nonlinear…

Soft Condensed Matter · Physics 2025-06-27 Kevin A. Mitchell , Md Mainul Hasan Sabbir , Sean Ricarte , Brandon Klein , Daniel A. Beller

In this study we investigate shallow turbidity density currents and underflows from mechanical point of view. We propose a simple hyperbolic model for such flows. On one hand, our model is based on very basic conservation principles. On the…

Fluid Dynamics · Physics 2020-02-20 Valery Liapidevskii , Denys Dutykh , Marguerite Gisclon

Continuum simulation is employed to study ion transport and fluid flow through a nanopore in a solid-state membrane under an applied potential drop. Results show the existence of concentration polarization layers on the surfaces of the…

Fluid Dynamics · Physics 2015-06-16 Mao Mao , Sandip Ghosal , Guohui Hu

Fluid-structure interactions between active and passive components are important for many biological systems to function. A particular example is chromatin in the cell nucleus, where ATP-powered processes drive coherent motions of the…

Soft Condensed Matter · Physics 2024-02-15 Scott Weady , David B. Stein , Alexandra Zidovska , Michael J. Shelley

We use particle dynamics simulations to probe the correlations between noise and dynamics in a variety of disordered systems, including superconducting vortices, 2D electron liquid crystals, colloids, domain walls, and granular media. The…

Superconductivity · Physics 2009-11-10 C. J. Olson Reichhardt , C. Reichhardt

We numerically study two-dimensional active nematics with periodic activity patterning. For stripes of activity, we observe a transition from two-dimensional to one-dimensional active turbulence as the maximum active force and distance…

Soft Condensed Matter · Physics 2025-03-11 Cody D. Schimming , C. J. O. Reichhardt , C. Reichhardt

We describe the thermodynamic state of a single-phase fluid confined to a porous medium with Hill's thermodynamics of small systems, also known as nanothermodynamics. This way of defining small system thermodynamics, with a separate set of…

Chemical Physics · Physics 2022-02-01 Olav Galteland , Michael T. Rauter , Kevin K. Varughese , Dick Bedeaux , Signe Kjelstrup

We introduce a closure model for coarse-grained kinetic theories of polar active fluids. Based on a quasi-equilibrium approximation of the particle distribution function, the model closely captures important analytical properties of the…

Soft Condensed Matter · Physics 2022-06-17 Scott Weady , David B. Stein , Michael J. Shelley

Using numerical simulations, we characterized the behavior of an elastic membrane immersed in an active fluid. Our findings reveal a nontrivial folding and re-expansion of the membrane that is controlled by the interplay of its resistance…

Soft Condensed Matter · Physics 2015-07-24 S. A. Mallory , C. Valeriani , A. Cacciuto

Models based on surfactant driven instabilities have been employed to describe pattern formation by swarming bacteria. However, by definition, such models cannot account for the effect of bacterial sensing and decision making. Here we…

Active emulsions can spontaneously form self-propelled droplets or phoretic micropumps. It has been predicted that the interaction with their self-generated chemical fields can lead to multistable higher-order flows and chemodynamic…

Spontaneously flowing liquids have been successfully engineered from a variety of biological and synthetic self-propelled units. Together with their orientational order, wave propagation in such active fluids have remained a subject of…

Soft Condensed Matter · Physics 2018-10-10 Delphine Geyer , Alexandre Morin , Denis Bartolo

When colloids flow in a narrow channel, the transport efficiency is controlled by the non-equilibrium interplay between colloid-wall interactions and hydrodynamics. In this paper, a general, unifying description of colloidal dispersion flow…

Fluid Dynamics · Physics 2018-06-12 Patrice Bacchin

When a nematic liquid crystal is confined in a porous medium with strong anchoring conditions, topological defects, called disclinations, are stably formed with numerous possible configurations. Since the energy barriers between them are…

Soft Condensed Matter · Physics 2015-06-12 Takeaki Araki

The emergence of long-range spatiotemporal order from intrinsic chaos is a central challenge in far-from-equilibrium physics. In active fluids, such as cytoskeletal networks driving cellular motion, self-generated flows typically produce…

We have developed several distinct model systems of microtubule-based 3D active isotropic fluids and have compared their dynamical and structural properties. The non-equilibrium dynamics of these fluids is powered by three different types…