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Whole brain segmentation using deep learning (DL) is a very challenging task since the number of anatomical labels is very high compared to the number of available training images. To address this problem, previous DL methods proposed to…

Image and Video Processing · Electrical Eng. & Systems 2019-11-22 Pierrick Coupé , Boris Mansencal , Michaël Clément , Rémi Giraud , Baudouin Denis de Senneville , Vinh-Thong Ta , Vincent Lepetit , José V. Manjon

Segmentation of white matter lesions and deep grey matter structures is an important task in the quantification of magnetic resonance imaging in multiple sclerosis. In this paper we explore segmentation solutions based on convolutional…

We propose a dual pathway, 11-layers deep, three-dimensional Convolutional Neural Network for the challenging task of brain lesion segmentation. The devised architecture is the result of an in-depth analysis of the limitations of current…

Computer Vision and Pattern Recognition · Computer Science 2017-01-10 Konstantinos Kamnitsas , Christian Ledig , Virginia F. J. Newcombe , Joanna P. Simpson , Andrew D. Kane , David K. Menon , Daniel Rueckert , Ben Glocker

Convolutional neural networks have been applied to a wide variety of computer vision tasks. Recent advances in semantic segmentation have enabled their application to medical image segmentation. While most CNNs use two-dimensional kernels,…

Computer Vision and Pattern Recognition · Computer Science 2017-07-26 Baris Kayalibay , Grady Jensen , Patrick van der Smagt

In this paper, we propose a fast fully convolutional neural network (FCNN) for crowd segmentation. By replacing the fully connected layers in CNN with 1 by 1 convolution kernels, FCNN takes whole images as inputs and directly outputs…

Computer Vision and Pattern Recognition · Computer Science 2014-11-18 Kai Kang , Xiaogang Wang

Inspired by recent advances in deep learning, we propose a framework for reconstructing dynamic sequences of 2D cardiac magnetic resonance (MR) images from undersampled data using a deep cascade of convolutional neural networks (CNNs) to…

Computer Vision and Pattern Recognition · Computer Science 2017-11-27 Jo Schlemper , Jose Caballero , Joseph V. Hajnal , Anthony Price , Daniel Rueckert

Image segmentation is a fundamental and challenging problem in computer vision with applications spanning multiple areas, such as medical imaging, remote sensing, and autonomous vehicles. Recently, convolutional neural networks (CNNs) have…

Computer Vision and Pattern Recognition · Computer Science 2020-06-24 Ali Hatamizadeh

The convolutional neural network-based methods have become more and more popular for medical image segmentation due to their outstanding performance. However, they struggle with capturing long-range dependencies, which are essential for…

Image and Video Processing · Electrical Eng. & Systems 2024-01-30 Hongkun Sun , Jing Xu , Yuping Duan

Purpose: To apply a convolutional neural network (CNN) to develop a system that segments intensity calibration phantom regions in computed tomography (CT) images, and to test the system in a large cohort to evaluate its robustness. Methods:…

Computer Vision and Pattern Recognition · Computer Science 2020-12-22 Keisuke Uemura , Yoshito Otake , Masaki Takao , Mazen Soufi , Akihiro Kawasaki , Nobuhiko Sugano , Yoshinobu Sato

We compare a set of convolutional neural network (CNN) architectures for the task of segmenting and detecting human sperm cells in an image taken from a semen sample. In contrast to previous work, samples are not stained or washed to allow…

Computer Vision and Pattern Recognition · Computer Science 2017-04-04 Malte Stær Nissen , Oswin Krause , Kristian Almstrup , Søren Kjærulff , Torben Trindkær Nielsen , Mads Nielsen

Collecting labeled data for the task of semantic segmentation is expensive and time-consuming, as it requires dense pixel-level annotations. While recent Convolutional Neural Network (CNN) based semantic segmentation approaches have…

Computer Vision and Pattern Recognition · Computer Science 2021-08-20 Xiangyun Zhao , Raviteja Vemulapalli , Philip Mansfield , Boqing Gong , Bradley Green , Lior Shapira , Ying Wu

Scaling CNN training is necessary to keep up with growing datasets and reduce training time. We also see an emerging need to handle datasets with very large samples, where memory requirements for training are large. Existing training…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-18 Nikoli Dryden , Naoya Maruyama , Tom Benson , Tim Moon , Marc Snir , Brian Van Essen

Brain extraction or whole brain segmentation is an important first step in many of the neuroimage analysis pipelines. The accuracy and robustness of brain extraction, therefore, is crucial for the accuracy of the entire brain analysis…

Computer Vision and Pattern Recognition · Computer Science 2017-06-21 Seyed Sadegh Mohseni Salehi , Deniz Erdogmus , Ali Gholipour

Whole brain segmentation from structural magnetic resonance imaging (MRI) is a prerequisite for most morphological analyses, but is computationally intense and can therefore delay the availability of image markers after scan acquisition. We…

Computer Vision and Pattern Recognition · Computer Science 2018-11-27 Abhijit Guha Roy , Sailesh Conjeti , Nassir Navab , Christian Wachinger

Algorithmic image-based diagnosis and prognosis of neurodegenerative diseases on longitudinal data has drawn great interest from computer vision researchers. The current state-of-the-art models for many image classification tasks are based…

Computer Vision and Pattern Recognition · Computer Science 2017-09-04 Jie Zhang , Qingyang Li , Richard J. Caselli , Jieping Ye , Yalin Wang

Convolutional neural networks (CNNs) show outstanding performance in many image processing problems, such as image recognition, object detection and image segmentation. Semantic segmentation is a very challenging task that requires…

Computer Vision and Pattern Recognition · Computer Science 2019-07-12 Fan Jia , Jun Liu , Xue-cheng Tai

One impressive advantage of convolutional neural networks (CNNs) is their ability to automatically learn feature representation from raw pixels, eliminating the need for hand-designed procedures. However, recent methods for single image…

Computer Vision and Pattern Recognition · Computer Science 2016-07-27 Yifan Wang , Lijun Wang , Hongyu Wang , Peihua Li

The work presented in this paper is to propose a reliable high-quality system of Convolutional Neural Network (CNN) for brain tumor segmentation with a low computation requirement. The system consists of a CNN for the main processing for…

Image and Video Processing · Electrical Eng. & Systems 2023-08-15 Yanming Sun , Chunyan Wang

Convolutional Neural Network(CNN) has been widely used for image recognition with great success. However, there are a number of limitations of the current CNN based image recognition paradigm. First, the receptive field of CNN is generally…

Computer Vision and Pattern Recognition · Computer Science 2018-03-28 Dong-Qing Zhang

Object segmentation and structure localization are important steps in automated image analysis pipelines for microscopy images. We present a convolution neural network (CNN) based deep learning architecture for segmentation of objects in…

Computer Vision and Pattern Recognition · Computer Science 2019-01-24 Shan E Ahmed Raza , Linda Cheung , Muhammad Shaban , Simon Graham , David Epstein , Stella Pelengaris , Michael Khan , Nasir M. Rajpoot