Related papers: Notes on matrix factorizations and knot homology
Given a grid diagram for a knot or link K in $S^3$, we construct a filtered spectrum whose homology is the knot Floer homology of K. We conjecture that the filtered homotopy type of the spectrum is an invariant of K. Our construction does…
Matrix factorization is an important mathematical problem encountered in the context of dictionary learning, recommendation systems and machine learning. We introduce a new `decimation' scheme that maps it to neural network models of…
We extend knot contact homology to a theory over the ring $\mathbb{Z}[\lambda^{\pm 1},\mu^{\pm 1}]$, with the invariant given topologically and combinatorially. The improved invariant, which is defined for framed knots in $S^3$ and can be…
Learning representations of nodes in a low dimensional space is a crucial task with many interesting applications in network analysis, including link prediction and node classification. Two popular approaches for this problem include matrix…
We study equivariant localization formulas for phase space path integrals when the phase space is a multiply connected compact Riemann surface. We consider the Hamiltonian systems to which the localization formulas are applicable and show…
Let L be a link in an thickened annulus. We specify the embedding of this annulus in the three sphere, and consider its complement thought of as the axis to L. In the right circumstances this axis lifts to a null-homologous knot in the…
This article surveys the use of configuration space integrals in the study of the topology of knot and link spaces. The main focus is the exposition of how these integrals produce finite type invariants of classical knots and links. More…
We study the sutured Floer homology invariants of the sutured manifold obtained by cutting a knot complement along a Seifert surface, R. We show that these invariants are finer than the "top term" of the knot Floer homology, which they…
Homotopy links have proven to be one of the most powerful tools of stratified homotopy theory. In previous work, we described combinatorial models for the generalized homotopy links of a stratified simplicial set. For many purposes, in…
We define the universal sl3-link homology, which depends on 3 parameters, following Khovanov's approach with foams. We show that this 3-parameter link homology, when taken with complex coefficients, can be divided into 3 isomorphism…
We determine the algebraic structure underlying the geometric complex associated to a link in Bar-Natan's geometric formalism of Khovanov's link homology theory (n=2). We find an isomorphism of complexes which reduces the complex to one in…
We define a differential graded algebra associated to Legendrian knots in Seifert fibered spaces with transverse contact structures. This construction is distinguished from other combinatorial realizations of contact homology invariants by…
A widely established set of unsupervised node embedding methods can be interpreted as consisting of two distinctive steps: i) the definition of a similarity matrix based on the graph of interest followed by ii) an explicit or implicit…
In this paper, we research the grid homology for spatial graphs with cut edges. We show that the grid homology for spatial graph $f$ is trivial if $f$ has sinks, sources, or cut edges. As an application, we give purely combinatorial proofs…
This chapter is based on a series of lectures that I gave at the National University of Singapore in April 2013. The notes survey the representation theory of the cyclotomic Hecke algebras of type A with an emphasis on understanding the KLR…
We aim at the construction of a Hidden Markov Model (HMM) of assigned complexity (number of states of the underlying Markov chain) which best approximates, in Kullback-Leibler divergence rate, a given stationary process. We establish, under…
Khovanov homology is a powerful link invariant: a categorification of the Jones polynomial that enjoys a rich and beautiful algebraic structure. This homology theory has been extensively studied and it has become an ubiquitous topic in…
We introduce natural language processing into the study of knot theory, as made natural by the braid word representation of knots. We study the UNKNOT problem of determining whether or not a given knot is the unknot. After describing an…
We define and analyze various generalizations of the punctual Hilbert scheme of the plane, associated to complex or real Lie algebras. Out of these, we construct new geometric structures on surfaces whose moduli spaces share multiple…
By applying Seifert's algorithm to a special alternating diagram of a link L, one obtains a Seifert surface F of L. We show that the support of the sutured Floer homology of the sutured manifold complementary to F is affine isomorphic to…