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Human brain activity generates scalp potentials (electroencephalography EEG), intracranial potentials (iEEG), and external magnetic fields (magnetoencephalography MEG), all capable of being recorded, often simultaneously, for use in…

MLE-Toolbox is a comprehensive open-source MATLAB toolbox for end-to-end analysis of magnetoencephalography (MEG) and electroencephalography (EEG) data. Inspired by widely used neuroimaging platforms such as Brainstorm and FieldTrip, it…

Source analysis of Electroencephalography (EEG) data requires the computation of the scalp potential induced by current sources in the brain. This so-called EEG forward problem is based on an accurate estimation of the volume conduction…

Translating neural networks from theory to clinical practice has unique challenges, specifically in the field of neuroimaging. In this paper, we present DeepNeuro, a deep learning framework that is best-suited to putting deep learning…

In this paper we present a new discretization strategy for the boundary element formulation of the Electroencephalography (EEG) forward problem. Boundary integral formulations, classically solved with the Boundary Element Method (BEM), are…

Glioblastoma, a highly aggressive brain tumor, poses major challenges due to its poor prognosis and high morbidity rates. Partial differential equation-based models offer promising potential to enhance therapeutic outcomes by simulating…

Accurate and efficient electroencephalography (EEG) analysis is essential for detecting seizures and artifacts in long-term monitoring, with applications spanning hospital diagnostics to wearable health devices. Robust EEG analytics have…

Adapting pre-trained deep learning segmentation models to new clinical domains is a persistent challenge in medical image analysis, particularly when annotated data at the target site are scarce. Parameter-efficient fine-tuning strategies…

Accurate and efficient analysis of materials properties from Nuclear Magnetic Resonance (NMR) relaxation data requires robust and efficient inversion procedures. Despite the great variety of applications requiring to process two-dimensional…

Deploying deep learning (DL) models in medical applications relies on predictive performance and other critical factors, such as conveying trustworthy predictive uncertainty. Uncertainty estimation (UE) methods provide potential solutions…

This study introduces a novel integration of the Brainstorm (BST) software and the Zeffiro Interface (ZI) to enable whole-head, multi-compartment volume conductor modeling for electroencephalography (EEG) source imaging, with a particular…

Data-driven deep learning has been successfully applied to various computed tomographic reconstruction problems. The deep inference models may outperform existing analytical and iterative algorithms, especially in ill-posed CT…

Electroencephalography (EEG) source imaging aims to infer brain activity from electrical potentials measured on the scalp. This is a difficult problem because many different source patterns can explain the same measurements. The result…

The increasing number of dispersed EEG dataset publications and the advancement of large-scale Electroencephalogram (EEG) models have increased the demand for practical tools to manage diverse EEG datasets. However, the inherent complexity…

This article introduces the Zeffiro interface (ZI) version 2.2 for brain imaging. ZI aims to provide a simple, accessible and multimodal open source platform for finite element method (FEM) based and graphics processing unit (GPU)…

Monte Carlo methods provide detailed and accurate results for radiation transport simulations. Unfortunately, the high computational cost of these methods limits its usage in real-time applications. Moreover, existing computer codes do not…

Cyanure is an open-source C++ software package with a Python interface. The goal of Cyanure is to provide state-of-the-art solvers for learning linear models, based on stochastic variance-reduced stochastic optimization with acceleration…

Deep neural networks (DNNs) have been proving the effectiveness in various computing fields. To provide more efficient computing platforms for DNN applications, it is essential to have evaluation environments that include assorted benchmark…

There are many applications scenarios for which the computational performance and memory footprint of the prediction phase of Deep Neural Networks (DNNs) needs to be optimized. Binary Neural Networks (BDNNs) have been shown to be an…

This paper presents a novel machine-hearing system that exploits deep neural networks (DNNs) and head movements for robust binaural localisation of multiple sources in reverberant environments. DNNs are used to learn the relationship…