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Related papers: Named Entity Recognition in Electronic Health Reco…

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Increasing volume of Electronic Health Records (EHR) in recent years provides great opportunities for data scientists to collaborate on different aspects of healthcare research by applying advanced analytics to these EHR clinical data. A…

Machine Learning · Computer Science 2019-10-01 Najibesadat Sadati , Milad Zafar Nezhad , Ratna Babu Chinnam , Dongxiao Zhu

Entity linking, the task of mapping textual mentions to known entities, has recently been tackled using contextualized neural networks. We address the question whether these results -- reported for large, high-quality datasets such as…

Computation and Language · Computer Science 2020-05-20 Nadja Kurz , Felix Hamann , Adrian Ulges

Ever-larger language models with ever-increasing capabilities are by now well-established text processing tools. Alas, information extraction tasks such as named entity recognition are still largely unaffected by this progress as they are…

Computation and Language · Computer Science 2023-08-16 Tobias Deußer , Lars Hillebrand , Christian Bauckhage , Rafet Sifa

Electronic health records (EHR) contain narrative notes that provide extensive details on the medical condition and management of patients. Natural language processing (NLP) of clinical notes can use observed frequencies of clinical terms…

Computation and Language · Computer Science 2023-07-04 Bryan Cai , Sihang Zeng , Yucong Lin , Zheng Yuan , Doudou Zhou , Lu Tian

Background. Previous state-of-the-art systems on Drug Name Recognition (DNR) and Clinical Concept Extraction (CCE) have focused on a combination of text "feature engineering" and conventional machine learning algorithms such as conditional…

Computation and Language · Computer Science 2018-06-26 Inigo Jauregi Unanue , Ehsan Zare Borzeshi , Massimo Piccardi

Biomedical named entity recognition (NER) is a critial task that aims to identify structured information in clinical text, which is often replete with complex, technical terms and a high degree of variability. Accurate and reliable NER can…

Computation and Language · Computer Science 2023-05-30 Zhiyi Li , Shengjie Zhang , Yujie Song , Jungyeul Park

Named Entity Recognition (NER) is a challenging and widely studied task that involves detecting and typing entities in text. So far,NER still approaches entity typing as a task of classification into universal classes (e.g. date, person, or…

Computation and Language · Computer Science 2023-02-22 Tristan Luiggi , Laure Soulier , Vincent Guigue , Siwar Jendoubi , Aurélien Baelde

Named entity recognition (NER) is highly sensitive to sentential syntactic and semantic properties where entities may be extracted according to how they are used and placed in the running text. To model such properties, one could rely on…

Computation and Language · Computer Science 2020-10-30 Yuyang Nie , Yuanhe Tian , Yan Song , Xiang Ao , Xiang Wan

Named entity discovery (NED) is an important information retrieval problem that can be decomposed into two sub-problems. The first sub-problem, named entity recognition (NER), aims to tag pre-defined sets of words in a vocabulary (called…

Information Retrieval · Computer Science 2018-11-27 Sammy Khalife , Michalis Vazirgiannis

Electronic Health Records (EHRs) are pivotal in clinical practices, yet their retrieval remains a challenge mainly due to semantic gap issues. Recent advancements in dense retrieval offer promising solutions but existing models, both…

Information Retrieval · Computer Science 2025-07-25 Zhengyun Zhao , Huaiyuan Ying , Yue Zhong , Sheng Yu

Supervised models trained to predict properties from representations have been achieving high accuracy on a variety of tasks. For instance, the BERT family seems to work exceptionally well on the downstream task from NER tagging to the…

Computation and Language · Computer Science 2020-12-22 Tejas Vaidhya , Ayush Kaushal

Named entity recognition (NER) is widely used in natural language processing applications and downstream tasks. However, most NER tools target flat annotation from popular datasets, eschewing the semantic information available in nested…

Computation and Language · Computer Science 2019-06-05 Nicky Ringland , Xiang Dai , Ben Hachey , Sarvnaz Karimi , Cecile Paris , James R. Curran

In the rapidly evolving field of healthcare and beyond, the integration of generative AI in Electronic Health Records (EHRs) represents a pivotal advancement, addressing a critical gap in current information extraction techniques. This…

Computation and Language · Computer Science 2024-06-03 Mohammed-Khalil Ghali , Abdelrahman Farrag , Hajar Sakai , Hicham El Baz , Yu Jin , Sarah Lam

Increasing volume of Electronic Health Records (EHR) in recent years provides great opportunities for data scientists to collaborate on different aspects of healthcare research by applying advanced analytics to these EHR clinical data. A…

Machine Learning · Computer Science 2019-09-23 Najibesadat Sadati , Milad Zafar Nezhad , Ratna Babu Chinnam , Dongxiao Zhu

This study is dedicated to exploring the application of prompt learning methods to advance Named Entity Recognition (NER) within the medical domain. In recent years, the emergence of large-scale models has driven significant progress in NER…

Computation and Language · Computer Science 2025-06-04 Jinzhu Yang

In a sentence, certain words are critical for its semantic. Among them, named entities (NEs) are notoriously challenging for neural models. Despite their importance, their accurate handling has been neglected in speech-to-text (S2T)…

Computation and Language · Computer Science 2023-03-14 Marco Gaido , Yun Tang , Ilia Kulikov , Rongqing Huang , Hongyu Gong , Hirofumi Inaguma

Large language models (LLMs) have demonstrated dominating performance in many NLP tasks, especially on generative tasks. However, they often fall short in some information extraction tasks, particularly those requiring domain-specific…

Computation and Language · Computer Science 2023-09-22 Junyi Bian , Jiaxuan Zheng , Yuyi Zhang , Shanfeng Zhu

Named entity recognition (NER) is usually developed and tested on text from well-written sources. However, in intelligent voice assistants, where NER is an important component, input to NER may be noisy because of user or speech recognition…

Zero-shot named entity recognition (NER) is the task of detecting named entities of specific types (such as 'Person' or 'Medicine') without any training examples. Current research increasingly relies on large synthetic datasets,…

Computation and Language · Computer Science 2025-03-10 Jonas Golde , Patrick Haller , Max Ploner , Fabio Barth , Nicolaas Jedema , Alan Akbik

Food Computing is currently a fast-growing field of research. Natural language processing (NLP) is also increasingly essential in this field, especially for recognising food entities. However, there are still only a few well-defined tasks…

Computation and Language · Computer Science 2022-04-19 Ania Wróblewska , Agnieszka Kaliska , Maciej Pawłowski , Dawid Wiśniewski , Witold Sosnowski , Agnieszka Ławrynowicz