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Graph representation learning has emerged as a powerful tool for preserving graph topology when mapping nodes to vector representations, enabling various downstream tasks such as node classification and community detection. However, most…

Machine Learning · Computer Science 2025-03-21 Kaizhe Fan , Quanjun Li

Knowledge representation learning has received a lot of attention in the past few years. The success of existing methods heavily relies on the quality of knowledge graphs. The entities with few triplets tend to be learned with less…

Computation and Language · Computer Science 2021-05-03 Huijuan Wang , Shuangyin Li , Rong Pan

Proteins perform much of the work in living organisms, and consequently the development of efficient computational methods for protein representation is essential for advancing large-scale biological research. Most current approaches…

Quantitative Methods · Quantitative Biology 2023-06-09 Francesco Ceccarelli , Lorenzo Giusti , Sean B. Holden , Pietro Liò

The exploitation of graph structures is the key to effectively learning representations of nodes that preserve useful information in graphs. A remarkable property of graph is that a latent hierarchical grouping of nodes exists in a global…

Artificial Intelligence · Computer Science 2021-11-02 Lu Lin , Ethan Blaser , Hongning Wang

Recent works for attributed network clustering utilize graph convolution to obtain node embeddings and simultaneously perform clustering assignments on the embedding space. It is effective since graph convolution combines the structural and…

Machine Learning · Computer Science 2021-04-16 Shuiqiao Yang , Sunny Verma , Borui Cai , Jiaojiao Jiang , Kun Yu , Fang Chen , Shui Yu

We are interested in multilayer graph clustering, which aims at dividing the graph nodes into categories or communities. To do so, we propose to learn a clustering-friendly embedding of the graph nodes by solving an optimization problem…

Machine Learning · Computer Science 2021-03-31 Mireille El Gheche , Pascal Frossard

Numerous Graph Neural Networks (GNNs) have been developed to tackle the challenge of Knowledge Graph Embedding (KGE). However, many of these approaches overlook the crucial role of relation information and inadequately integrate it with…

Machine Learning · Computer Science 2024-09-24 Peyman Baghershahi , Reshad Hosseini , Hadi Moradi

Graph Neural Networks (GNNs) have led to state-of-the-art performance on a variety of machine learning tasks such as recommendation, node classification and link prediction. Graph neural network models generate node embeddings by merging…

Machine Learning · Computer Science 2020-11-04 Yunpeng Weng , Xu Chen , Liang Chen , Wei Liu

Recent advances in machine learning research have produced powerful neural graph embedding methods, which learn useful, low-dimensional vector representations of network data. These neural methods for graph embedding excel in graph machine…

Physics and Society · Physics 2024-11-05 Sadamori Kojaku , Filippo Radicchi , Yong-Yeol Ahn , Santo Fortunato

Can neural networks learn to compare graphs without feature engineering? In this paper, we show that it is possible to learn representations for graph similarity with neither domain knowledge nor supervision (i.e.\ feature engineering or…

Machine Learning · Computer Science 2019-04-23 Rami Al-Rfou , Dustin Zelle , Bryan Perozzi

Graph Representation Learning (GRL) is a fundamental task in machine learning, aiming to encode high-dimensional graph-structured data into low-dimensional vectors. Self-Supervised Learning (SSL) methods are widely used in GRL because they…

Machine Learning · Computer Science 2025-06-13 Shifeng Xie , Aref Einizade , Jhony H. Giraldo

Heterogeneous graphs (HGs) also known as heterogeneous information networks have become ubiquitous in real-world scenarios; therefore, HG embedding, which aims to learn representations in a lower-dimension space while preserving the…

Social and Information Networks · Computer Science 2020-12-02 Xiao Wang , Deyu Bo , Chuan Shi , Shaohua Fan , Yanfang Ye , Philip S. Yu

Continual Graph Learning (CGL) enables models to incrementally learn from streaming graph-structured data without forgetting previously acquired knowledge. Experience replay is a common solution that reuses a subset of past samples during…

Machine Learning · Computer Science 2026-03-31 Qiao Yuan , Sheng-Uei Guan , Pin Ni , Tianlun Luo , Ka Lok Man , Prudence Wong , Victor Chang

Combining the message-passing paradigm with the global attention mechanism has emerged as an effective framework for learning over graphs. The message-passing paradigm and the global attention mechanism fundamentally generate node…

Machine Learning · Computer Science 2025-09-30 Haimin Zhang , Jiahao Xia , Min Xu

Graph representation learning (also known as network embedding) has been extensively researched with varying levels of granularity, ranging from nodes to graphs. While most prior work in this area focuses on node-level representation,…

Machine Learning · Computer Science 2023-06-05 Lili Wang , Chenghan Huang , Weicheng Ma , Xinyuan Cao , Soroush Vosoughi

Embedding static graphs in low-dimensional vector spaces plays a key role in network analytics and inference, supporting applications like node classification, link prediction, and graph visualization. However, many real-world networks…

Machine Learning · Computer Science 2021-07-23 Claudio D. T. Barros , Matheus R. F. Mendonça , Alex B. Vieira , Artur Ziviani

In machine learning, graph embedding algorithms seek low-dimensional representations of the input network data, thereby allowing for downstream tasks on compressed encodings. Recently, within the framework of network renormalization,…

Physics and Society · Physics 2025-08-29 Riccardo Milocco , Fabian Jansen , Diego Garlaschelli

Graph embedding has been widely applied in areas such as network analysis, social network mining, recommendation systems, and bioinformatics. However, current graph construction methods often require the prior definition of neighborhood…

Machine Learning · Computer Science 2025-10-08 S. Peng , L. Hu , W. Zhang , B. Jie , Y. Luo

Knowledge graph embedding is an important task and it will benefit lots of downstream applications. Currently, deep neural networks based methods achieve state-of-the-art performance. However, most of these existing methods are very complex…

Artificial Intelligence · Computer Science 2020-11-02 Feiliang Ren , Juchen Li , Huihui Zhang , Shilei Liu , Bochao Li , Ruicheng Ming , Yujia Bai

Adversarial training, in which a network is trained on both adversarial and clean examples, is one of the most trusted defense methods against adversarial attacks. However, there are three major practical difficulties in implementing and…

Machine Learning · Computer Science 2019-10-11 Shixian Wen , Laurent Itti