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Random graphs are more and more used for modeling real world networks such as evolutionary networks of proteins. For this purpose we look at two different models and analyze how properties like connectedness and degree distributions are…

Probability · Mathematics 2019-02-05 Klemens Taglieber , Uta Freiberg

In weighted graphs the shortest path between two nodes is often reached through an indirect path, out of all possible connections, leading to structural redundancies which play key roles in the dynamics and evolution of complex networks. We…

Social and Information Networks · Computer Science 2023-06-14 Felipe Xavier Costa , Rion Brattig Correia , Luis M. Rocha

Accurately determining and classifying the structure of complex networks is the focus of much current research. One class of network of particular interest are metabolic pathways, which have previously been studied from a graph theoretical…

Mathematical Physics · Physics 2012-10-10 Henry Dorrian , Kieran Smallbone , Jon borresen

In recent work we presented a new approach to the analysis of weighted networks, by providing a straightforward generalization of any network measure defined on unweighted networks. This approach is based on the translation of a weighted…

Data Analysis, Statistics and Probability · Physics 2008-06-05 S. E. Ahnert , D. Garlaschelli , T. M. A. Fink , G. Caldarelli

Many real life networks present an average path length logarithmic with the number of nodes and a degree distribution which follows a power law. Often these networks have also a modular and self-similar structure and, in some cases -…

Statistical Mechanics · Physics 2009-02-26 Alicia Miralles , Lichao Chen , Zhongzhi Zhang , Francesc Comellas

Graph theory constitutes a widely used and established field providing powerful tools for the characterization of complex networks. The intricate topology of networks can also be investigated by means of the collective dynamics observed in…

Physics and Society · Physics 2018-05-09 Matthieu Gilson , Nikos E Kouvaris , Gustavo Deco , Gorka Zamora-López

Many community detection algorithms require the introduction of a measure on the set of nodes. Previously, a lot of efforts have been made to find the top-performing measures. In most cases, experiments were conducted on several datasets or…

Social and Information Networks · Computer Science 2021-11-03 Rinat Aynulin

This paper introduces some tools from graph theory and distributed consensus algorithms to construct an optimal, yet robust, hierarchical information sharing structure for large-scale decision making and control problems. The proposed…

Systems and Control · Computer Science 2012-08-16 Amir Noori

Network-valued data are encountered in a wide range of applications and pose challenges in learning due to their complex structure and absence of vertex correspondence. Typical examples of such problems include classification or grouping of…

Machine Learning · Computer Science 2021-11-09 Mahalakshmi Sabanayagam , Leena Chennuru Vankadara , Debarghya Ghoshdastidar

In this work we study the dynamics of systems composed of numerous interacting elements interconnected through a random weighted directed graph, such as models of random neural networks. We develop an original theoretical approach based on…

Chaotic Dynamics · Physics 2015-09-30 Gilles Wainrib , Mathieu Galtier

Understanding the interactions among nodes in a complex network is of great importance, since they disclose how these nodes are cooperatively supporting the functioning of the network. Scientists have developed numerous methods to uncover…

Physics and Society · Physics 2017-09-13 Chengwei Wang , Celso Grebogi , Murilo S. Baptista

A powerful framework for studying graphs is to consider them as geometric graphs: nodes are randomly sampled from an underlying metric space, and any pair of nodes is connected if their distance is less than a specified neighborhood radius.…

Machine Learning · Computer Science 2022-11-28 Raffaele Paolino , Aleksandar Bojchevski , Stephan Günnemann , Gitta Kutyniok , Ron Levie

The computation of distance measures between nodes in graphs is inefficient and does not scale to large graphs. We explore dense vector representations as an effective way to approximate the same information: we introduce a simple yet…

Computation and Language · Computer Science 2019-06-18 Andrey Kutuzov , Mohammad Dorgham , Oleksiy Oliynyk , Chris Biemann , Alexander Panchenko

Over the last two decades, network theory has shown to be a fruitful paradigm in understanding the organization and functioning of real-world complex systems. One technique helpful to this endeavor is identifying functionally influential…

Physics and Society · Physics 2022-01-24 Francesco Picciolo , Franco Ruzzenenti , Petter Holme , Rossana Mastrandrea

In the past two decades, significant advances have been made in understanding the structural and functional properties of biological networks, via graph-theoretic analysis. In general, most graph-theoretic studies are conducted in the…

Physics and Society · Physics 2013-10-21 Michelle Rudolph-Lilith , Lyle E. Muller

Modeling power transmission networks is an important area of research with applications such as vulnerability analysis, study of cascading failures, and location of measurement devices. Graph-theoretic approaches have been widely used to…

We propose an alternative interpretation of Markovian transport models based on the well-mixedness condition, in terms of the properties of a random velocity field with second order structure functions scaling linearly in the space time…

Chaotic Dynamics · Physics 2009-11-10 Piero Olla , Paolo Paradisi

Networks and network processes have emerged as powerful tools for modeling social interactions, disease propagation, and a variety of additional dynamics driven by relational structures. Recently, neural networks have been generalized to…

Signal Processing · Electrical Eng. & Systems 2019-12-06 T. Mitchell Roddenberry , Santiago Segarra

This paper proposes and analyzes a novel clustering algorithm that combines graph-based diffusion geometry with techniques based on density and mode estimation. The proposed method is suitable for data generated from mixtures of…

Machine Learning · Statistics 2019-01-01 Mauro Maggioni , James M. Murphy

We apply the Lagrangian approach to study surface transport and mixing in the ocean. New tools have been developed to track the motion of water masses, their origin and fate and to quantify transport and mixing. To illustrate the methods…

Atmospheric and Oceanic Physics · Physics 2017-08-23 S. V. Prants , M. V. Budyansky , M. Yu. Uleysky