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Open-source scientific software is a major driver of scientific progress, yet its development and reuse remain difficult in collaborative settings. Researchers repeatedly face four recurring challenges: discovering and reproducing existing…

Digital Libraries · Computer Science 2026-04-22 Jan Philipp Albrecht , Deborah Schmidt , Lucas Rieckert , Maximilian Otto , Kyle Harrington

AsaPy is a custom-made Python library designed to simplify and optimize the analysis of aerospace simulation data. Instead of introducing new methodologies, it excels in combining various established techniques, creating a unified,…

Replication crises have shaken the scientific landscape during the last decade. As potential solutions, open science practices were heavily discussed and have been implemented with varying success in different disciplines. We argue that…

Computers and Society · Computer Science 2023-10-05 David Schoch , Chung-hong Chan , Claudia Wagner , Arnim Bleier

While software and algorithms have become increasingly important in astronomy, the majority of authors who publish computational astronomy research do not share the source code they develop, making it difficult to replicate and reuse the…

Instrumentation and Methods for Astrophysics · Physics 2013-04-26 Lior Shamir , John F. Wallin , Alice Allen , Bruce Berriman , Peter Teuben , Robert J. Nemiroff , Jessica Mink , Robert J. Hanisch , Kimberly DuPrie

Sustainable software ecosystems are difficult to build, and require concerted effort, community norms and collaborations. In science it is especially important to establish communities in which faculty, staff, students and open-source…

Software Engineering · Computer Science 2013-09-13 Marcus D. Hanwell , Amitha Perera , Wes Turner , Patrick O'Leary , Katie Osterdahl , Bill Hoffman , Will Schroeder

Challenges to reproducibility and replicability have gained widespread attention, driven by large replication projects with lukewarm success rates. A nascent work has emerged developing algorithms to estimate the replicability of published…

Digital Libraries · Computer Science 2024-05-06 Chuhao Wu , Tatiana Chakravorti , John Carroll , Sarah Rajtmajer

The Python ecosystem represents a global, data rich, technology-enabled network. By analyzing Python's dependency network, its top 14 most imported libraries and cPython (or core Python) libraries, this research finds clear evidence the…

Social and Information Networks · Computer Science 2022-01-19 Thomas Pike , Robert Colter , Mark Bailey , Jackie Kazil , John Speed Meyers

The reproducibility crisis in scientific computing constrains robotics research. Existing studies reveal that up to 70% of robotics algorithms cannot be reproduced by independent teams, while many others fail to reach deployment because…

The "crisis of reproducibility" has been a significant source of controversy, heated debate, and calls for reform to institutional science in recent years. As a long-term solution to address both the present crisis and future obstacles, I…

Computers and Society · Computer Science 2018-04-24 Gopal P. Sarma

Across almost all scientific disciplines, the instruments that record our experimental data and the methods required for storage and data analysis are rapidly increasing in complexity. This gives rise to the need for scientific communities…

Physics Education · Physics 2018-09-26 Daniela Huppenkothen , Anthony Arendt , David W. Hogg , Karthik Ram , Jake VanderPlas , Ariel Rokem

Particle physics has an ambitious and broad experimental programme for the coming decades. This programme requires large investments in detector hardware, either to build new facilities and experiments, or to upgrade existing ones.…

Computational Physics · Physics 2020-02-07 Johannes Albrecht , Antonio Augusto Alves , Guilherme Amadio , Giuseppe Andronico , Nguyen Anh-Ky , Laurent Aphecetche , John Apostolakis , Makoto Asai , Luca Atzori , Marian Babik , Giuseppe Bagliesi , Marilena Bandieramonte , Sunanda Banerjee , Martin Barisits , Lothar A. T. Bauerdick , Stefano Belforte , Douglas Benjamin , Catrin Bernius , Wahid Bhimji , Riccardo Maria Bianchi , Ian Bird , Catherine Biscarat , Jakob Blomer , Kenneth Bloom , Tommaso Boccali , Brian Bockelman , Tomasz Bold , Daniele Bonacorsi , Antonio Boveia , Concezio Bozzi , Marko Bracko , David Britton , Andy Buckley , Predrag Buncic , Paolo Calafiura , Simone Campana , Philippe Canal , Luca Canali , Gianpaolo Carlino , Nuno Castro , Marco Cattaneo , Gianluca Cerminara , Javier Cervantes Villanueva , Philip Chang , John Chapman , Gang Chen , Taylor Childers , Peter Clarke , Marco Clemencic , Eric Cogneras , Jeremy Coles , Ian Collier , David Colling , Gloria Corti , Gabriele Cosmo , Davide Costanzo , Ben Couturier , Kyle Cranmer , Jack Cranshaw , Leonardo Cristella , David Crooks , Sabine Crépé-Renaudin , Robert Currie , Sünje Dallmeier-Tiessen , Kaushik De , Michel De Cian , Albert De Roeck , Antonio Delgado Peris , Frédéric Derue , Alessandro Di Girolamo , Salvatore Di Guida , Gancho Dimitrov , Caterina Doglioni , Andrea Dotti , Dirk Duellmann , Laurent Duflot , Dave Dykstra , Katarzyna Dziedziniewicz-Wojcik , Agnieszka Dziurda , Ulrik Egede , Peter Elmer , Johannes Elmsheuser , V. Daniel Elvira , Giulio Eulisse , Steven Farrell , Torben Ferber , Andrej Filipcic , Ian Fisk , Conor Fitzpatrick , José Flix , Andrea Formica , Alessandra Forti , Giovanni Franzoni , James Frost , Stu Fuess , Frank Gaede , Gerardo Ganis , Robert Gardner , Vincent Garonne , Andreas Gellrich , Krzysztof Genser , Simon George , Frank Geurts , Andrei Gheata , Mihaela Gheata , Francesco Giacomini , Stefano Giagu , Manuel Giffels , Douglas Gingrich , Maria Girone , Vladimir V. Gligorov , Ivan Glushkov , Wesley Gohn , Jose Benito Gonzalez Lopez , Isidro González Caballero , Juan R. González Fernández , Giacomo Govi , Claudio Grandi , Hadrien Grasland , Heather Gray , Lucia Grillo , Wen Guan , Oliver Gutsche , Vardan Gyurjyan , Andrew Hanushevsky , Farah Hariri , Thomas Hartmann , John Harvey , Thomas Hauth , Benedikt Hegner , Beate Heinemann , Lukas Heinrich , Andreas Heiss , José M. Hernández , Michael Hildreth , Mark Hodgkinson , Stefan Hoeche , Burt Holzman , Peter Hristov , Xingtao Huang , Vladimir N. Ivanchenko , Todor Ivanov , Jan Iven , Brij Jashal , Bodhitha Jayatilaka , Roger Jones , Michel Jouvin , Soon Yung Jun , Michael Kagan , Charles William Kalderon , Meghan Kane , Edward Karavakis , Daniel S. Katz , Dorian Kcira , Oliver Keeble , Borut Paul Kersevan , Michael Kirby , Alexei Klimentov , Markus Klute , Ilya Komarov , Dmitri Konstantinov , Patrick Koppenburg , Jim Kowalkowski , Luke Kreczko , Thomas Kuhr , Robert Kutschke , Valentin Kuznetsov , Walter Lampl , Eric Lancon , David Lange , Mario Lassnig , Paul Laycock , Charles Leggett , James Letts , Birgit Lewendel , Teng Li , Guilherme Lima , Jacob Linacre , Tomas Linden , Miron Livny , Giuseppe Lo Presti , Sebastian Lopienski , Peter Love , Adam Lyon , Nicolò Magini , Zachary L. Marshall , Edoardo Martelli , Stewart Martin-Haugh , Pere Mato , Kajari Mazumdar , Thomas McCauley , Josh McFayden , Shawn McKee , Andrew McNab , Rashid Mehdiyev , Helge Meinhard , Dario Menasce , Patricia Mendez Lorenzo , Alaettin Serhan Mete , Michele Michelotto , Jovan Mitrevski , Lorenzo Moneta , Ben Morgan , Richard Mount , Edward Moyse , Sean Murray , Armin Nairz , Mark S. Neubauer , Andrew Norman , Sérgio Novaes , Mihaly Novak , Arantza Oyanguren , Nurcan Ozturk , Andres Pacheco Pages , Michela Paganini , Jerome Pansanel , Vincent R. Pascuzzi , Glenn Patrick , Alex Pearce , Ben Pearson , Kevin Pedro , Gabriel Perdue , Antonio Perez-Calero Yzquierdo , Luca Perrozzi , Troels Petersen , Marko Petric , Andreas Petzold , Jónatan Piedra , Leo Piilonen , Danilo Piparo , Jim Pivarski , Witold Pokorski , Francesco Polci , Karolos Potamianos , Fernanda Psihas , Albert Puig Navarro , Günter Quast , Gerhard Raven , Jürgen Reuter , Alberto Ribon , Lorenzo Rinaldi , Martin Ritter , James Robinson , Eduardo Rodrigues , Stefan Roiser , David Rousseau , Gareth Roy , Grigori Rybkine , Andre Sailer , Tai Sakuma , Renato Santana , Andrea Sartirana , Heidi Schellman , Jaroslava Schovancová , Steven Schramm , Markus Schulz , Andrea Sciabà , Sally Seidel , Sezen Sekmen , Cedric Serfon , Horst Severini , Elizabeth Sexton-Kennedy , Michael Seymour , Davide Sgalaberna , Illya Shapoval , Jamie Shiers , Jing-Ge Shiu , Hannah Short , Gian Piero Siroli , Sam Skipsey , Tim Smith , Scott Snyder , Michael D. Sokoloff , Panagiotis Spentzouris , Hartmut Stadie , Giordon Stark , Gordon Stewart , Graeme A. Stewart , Arturo Sánchez , Alberto Sánchez-Hernández , Anyes Taffard , Umberto Tamponi , Jeff Templon , Giacomo Tenaglia , Vakhtang Tsulaia , Christopher Tunnell , Eric Vaandering , Andrea Valassi , Sofia Vallecorsa , Liviu Valsan , Peter Van Gemmeren , Renaud Vernet , Brett Viren , Jean-Roch Vlimant , Christian Voss , Margaret Votava , Carl Vuosalo , Carlos Vázquez Sierra , Romain Wartel , Gordon T. Watts , Torre Wenaus , Sandro Wenzel , Mike Williams , Frank Winklmeier , Christoph Wissing , Frank Wuerthwein , Benjamin Wynne , Zhang Xiaomei , Wei Yang , Efe Yazgan

Biophysics is a subject that is spread over many disciplines and transcends the skills and knowledge of the individual student. This makes it challenging both to teach and to learn. Educational materials are described to aid in teaching…

Physics Education · Physics 2015-06-15 J. M. Deutsch

The rapid growth of AI conferences is straining an already fragile peer-review system, leading to heavy reviewer workloads, expertise mismatches, inconsistent evaluation standards, superficial or templated reviews, and limited…

Computer Vision and Pattern Recognition · Computer Science 2026-02-10 Jing Yang , Qiyao Wei , Jiaxin Pei

Onboard autonomy technologies such as planning and scheduling, identification of scientific targets, and content-based data summarization, will lead to exciting new space science missions. However, the challenge of operating missions with…

Recent workshops brought together several developers, educators and users of software packages extending popular languages for spatial data handling, with a primary focus on R, Python and Julia. Common challenges discussed included handling…

The HL-LHC presents significant challenges for the HEP analysis community. The number of events in each analysis is expected to increase by an order of magnitude and new techniques are expected to be required; both challenges necessitate…

Many research groups aspire to make data and code FAIR and reproducible, yet struggle because the data and code life cycles are disconnected, executable environments are often missing from published work, and technical skill requirements…

Open science initiatives seek to make research outputs more transparent, accessible, and reusable, but ensuring that published findings can be independently reproduced remains a persistent challenge. In this paper we describe an AI-driven…

Artificial Intelligence · Computer Science 2025-12-16 Adrien Bibal , Steven N. Minton , Deborah Khider , Yolanda Gil

Reproducing scientific analyses is essential for preserving knowledge, building extensible codebases, and deepening researcher understanding - yet the effort often outweighs its academic recognition. We argue that the reproduction of…

High Energy Physics - Phenomenology · Physics 2026-04-22 Joschka Birk , Gregor Kasieczka , Siddharth Mishra-Sharma , Benjamin Nachman , Dennis Noll , Tanvi Wamorkar

The recent successes and wide spread application of compute intensive machine learning and data analytics methods have been boosting the usage of the Python programming language on HPC systems. While Python provides many advantages for the…

Machine Learning · Computer Science 2020-12-02 Dominik Strassel , Philipp Reusch , Janis Keuper
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