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Related papers: Precise spatial scaling in the early fly embryo

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Recent advancements in Spatial Transcriptomics (ST) technology have facilitated detailed gene expression analysis within tissue contexts. However, the high costs and methodological limitations of ST necessitate a more robust predictive…

Computer Vision and Pattern Recognition · Computer Science 2024-04-26 Youngmin Chung , Ji Hun Ha , Kyeong Chan Im , Joo Sang Lee

We monitored isotropic spreading of mouse embryonic fibroblasts on fibronectin-coated substrates. Cell adhesion area versus time was measured via total internal reflection fluorescence microscopy. Spreading proceeds in well-defined phases.…

Cell Behavior · Quantitative Biology 2009-11-10 H. -G. Doebereiner , B. J. Dubin-Thaler , G. Giannone , H. S. Xenias , M. P. Sheetz

Understanding how multicellular organisms reliably orchestrate cell-fate decisions is a central challenge in developmental biology. This is particularly intriguing in early mammalian development, where early cell-lineage differentiation…

Biological Physics · Physics 2024-03-14 Michael A. Ramirez-Sierra , Thomas R. Sokolowski

The human brains are organized into hierarchically modular networks facilitating efficient and stable information processing and supporting diverse cognitive processes during the course of development. While the remarkable reconfiguration…

Neurons and Cognition · Quantitative Biology 2020-09-16 Xuyun Wen , Liming Hsu , Weili Lin , Han Zhang , Dinggang Shen

Biological cells replicate their genomes in a well-planned manner. The DNA replication program of an organism determines the timing at which different genomic regions are replicated, with fundamental consequences for cell homeostasis and…

Subcellular Processes · Quantitative Biology 2024-05-28 Florian Pflug , Deepak Bhat , Simone Pigolotti

The present study deals with the problem of deriving the coefficients of the fundamental plane (FP) of early-type galaxies. We introduce statistical models of the FP and relative fitting methods: the MIST (Measurement errors and Intrinsic…

Astrophysics · Physics 2007-05-23 F. La Barbera , G. Busarello , M. Capaccioli

Understanding the structure and dynamics of liquids is pivotal for the study of larger spatiotemporal processes, especially in glass-forming materials at low temperatures. Density scaling, observed in many molecular systems through…

Soft Condensed Matter · Physics 2024-10-29 Jaehyeok Jin , David R. Reichman , Jeppe C. Dyre , Ulf R. Pedersen

We study the evolution of streams in a time-dependent spherical gravitational potential. Our goal is to establish what are the imprints of this time evolution on the properties of streams as well as their observability. To this end, we have…

Astrophysics of Galaxies · Physics 2015-12-02 Hans J. T. Buist , Amina Helmi

We consider the speed of propagation of a {continuous-time continuous-space} branching random walk with the additional restriction that the birth rate at any spatial point cannot exceed $1$. The dispersion kernel is taken to have density…

Probability · Mathematics 2022-02-23 Viktor Bezborodov , Luca Di Persio , Tyll Krueger , Pasha Tkachov

In many tissues, cell type varies over single-cell length-scales, creating detailed spatial heterogeneities fundamental to physiological function. To gain understanding of this relationship between tissue function and detailed structure,…

Characterizing the link between small-scale chromatin structure and large-scale chromosome folding during interphase is a prerequisite for understanding transcription. Yet, this link remains poorly investigated. Here, we introduce a simple…

Soft Condensed Matter · Physics 2016-09-28 Ana Maria Florescu , Pierre Therizols , Angelo Rosa

A major challenge in clinical In-Vitro Fertilization (IVF) is selecting the highest quality embryo to transfer to the patient in the hopes of achieving a pregnancy. Time-lapse microscopy provides clinicians with a wealth of information for…

We study the approach to scaling in axion string networks in the radiation era, through measuring the root-mean-square velocity $v$ as well as the scaled mean string separation $x$. We find good evidence for a fixed point in the phase-space…

Cosmology and Nongalactic Astrophysics · Physics 2021-06-02 Mark Hindmarsh , Joanes Lizarraga , Asier Lopez-Eiguren , Jon Urrestilla

Natural selection for terrestrial locomotion has yielded unifying patterns in the body shape of legged animals, often manifesting as scaling laws. One such pattern appears in the frontal aspect ratio. Smaller animals like insects typically…

Biological Physics · Physics 2026-02-03 Neelima Sharma , Madhusudhan Venkadesan

High-frequency ultrasound (HFU) is well suited for imaging embryonic mice in vivo because it is non-invasive and real-time. Manual segmentation of the brain ventricles (BVs) and whole body from 3D HFU images is time-consuming and requires…

Image and Video Processing · Electrical Eng. & Systems 2019-09-25 Ziming Qiu , Nitin Nair , Jack Langerman , Orlando Aristizabal , Jonathan Mamou , Daniel H. Turnbull , Jeffrey A. Ketterling , Yao Wang

Inhomogeneities in deposition may lead to formation of rough surfaces, whose height fluctuations can be probed directly by scanning microscopy, or indirectly by scattering. Analytical or numerical treatments of simple growth models suggest…

Condensed Matter · Physics 2009-10-28 Mehran Kardar

As a first approximation, early embryos may be modeled as foams whose shape depends on the surface tensions of each cell. However it has been remarked that exist line tensions at polarized exterior cellular interfaces (apical). In order to…

Numerical Analysis · Mathematics 2025-04-10 Fabrice Delbary

The Bayesian MAMPOSSt mass/orbit modeling algorithm is used to jointly fit the distribution of elliptical, spiral (and irregular), and lenticular galaxies in projected phase space, on 3 stacked clusters (with normalized positions and…

Astrophysics of Galaxies · Physics 2019-11-06 G. A. Mamon , A. Cava , A. Biviano , A. Moretti , B. Poggianti , D. Bettoni

We study the motion of radially driven fluid-immersed particles in a novel Hele-Shaw cell with open boundaries. The initially uniform suspension forms a striped pattern within a specific range of horizontal oscillation frequencies and for…

Soft Condensed Matter · Physics 2021-11-02 Mahdieh Mohammadi , Maniya Maleki , Adam Wysocki , M. Reza Shaebani

Scaling laws illuminate Nature's fundamental biological principles and guide bioinspired materials and structural designs. In simple cases they are based on the fundamental principle that all laws of nature remain unchanged (i.e.,…

Biological Physics · Physics 2025-02-18 Huan Liu , Shashank Priya , Richard D. James