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Medical image segmentation models are typically supervised by expert annotations at the pixel-level, which can be expensive to acquire. In this work, we propose a method that combines the high quality of pixel-level expert annotations with…

Computer Vision and Pattern Recognition · Computer Science 2021-05-18 Soham Gadgil , Mark Endo , Emily Wen , Andrew Y. Ng , Pranav Rajpurkar

Nodule segmentation from breast ultrasound images is challenging yet essential for the diagnosis. Weakly-supervised segmentation (WSS) can help reduce time-consuming and cumbersome manual annotation. Unlike existing weakly-supervised…

Computer Vision and Pattern Recognition · Computer Science 2021-08-03 Yuhao Huang , Xin Yang , Yuxin Zou , Chaoyu Chen , Jian Wang , Haoran Dou , Nishant Ravikumar , Alejandro F Frangi , Jianqiao Zhou , Dong Ni

The scarcity of pixel-level annotation is a prevalent problem in medical image segmentation tasks. In this paper, we introduce a novel regularization strategy involving interpolation-based mixing for semi-supervised medical image…

Image and Video Processing · Electrical Eng. & Systems 2022-02-04 Hritam Basak , Rajarshi Bhattacharya , Rukhshanda Hussain , Agniv Chatterjee

The time-consuming task of manual segmentation challenges routine systematic quantification of disease burden. Convolutional neural networks (CNNs) hold significant promise to reliably identify locations and boundaries of tumors from PET…

Collecting annotated data for semantic segmentation is time-consuming and hard to scale up. In this paper, we for the first time propose a unified framework, termed as Multi-Dataset Pretraining, to take full advantage of the fragmented…

Computer Vision and Pattern Recognition · Computer Science 2021-06-09 Bowen Shi , Xiaopeng Zhang , Haohang Xu , Wenrui Dai , Junni Zou , Hongkai Xiong , Qi Tian

Often in medical imaging, it is prohibitively challenging to produce enough boundary annotations to train deep neural networks for accurate tumor segmentation. We propose the use of weak labels about whether an image presents tumor or…

Computer Vision and Pattern Recognition · Computer Science 2021-06-15 Eugene Vorontsov , Pavlo Molchanov , Christopher Beckham , Jan Kautz , Samuel Kadoury

It is generally accepted that one of the critical parts of current vision algorithms based on deep learning and convolutional neural networks is the annotation of a sufficient number of images to achieve competitive performance. This is…

Computer Vision and Pattern Recognition · Computer Science 2021-03-05 Kai Yao , Alberto Ortiz , Francisco Bonnin-Pascual

In recent years, Convolutional Neural Networks (CNNs) have become the state-of-the-art method for biomedical image analysis. However, these networks are usually trained in a supervised manner, requiring large amounts of labelled training…

Computer Vision and Pattern Recognition · Computer Science 2020-11-24 Nastassya Horlava , Alisa Mironenko , Sebastian Niehaus , Sebastian Wagner , Ingo Roeder , Nico Scherf

Limited by the expensive labeling, polyp segmentation models are plagued by data shortages. To tackle this, we propose the mixed supervised polyp segmentation paradigm (MixPolyp). Unlike traditional models relying on a single type of…

Computer Vision and Pattern Recognition · Computer Science 2024-09-26 Yiwen Hu , Jun Wei , Yuncheng Jiang , Haoyang Li , Shuguang Cui , Zhen Li , Song Wu

Weakly supervised nuclei segmentation is a critical problem for pathological image analysis and greatly benefits the community due to the significant reduction of labeling cost. Adopting point annotations, previous methods mostly rely on…

Image and Video Processing · Electrical Eng. & Systems 2022-02-14 Weizhen Liu , Qian He , Xuming He

Due to the lack of expertise for medical image annotation, the investigation of label-efficient methodology for medical image segmentation becomes a heated topic. Recent progresses focus on the efficient utilization of weak annotations…

Image and Video Processing · Electrical Eng. & Systems 2022-03-14 Junwen Pan , Qi Bi , Yanzhan Yang , Pengfei Zhu , Cheng Bian

In this work we propose a pragmatic method that reduces the annotation cost for structured label spaces using active learning. Our approach leverages partial annotation, which reduces labeling costs for structured outputs by selecting only…

Computation and Language · Computer Science 2023-10-20 Zhisong Zhang , Emma Strubell , Eduard Hovy

Medical image segmentation annotations suffer from inter- and intra-observer variations even among experts due to intrinsic differences in human annotators and ambiguous boundaries. Leveraging a collection of annotators' opinions for an…

Image and Video Processing · Electrical Eng. & Systems 2021-05-04 Zahra Mirikharaji , Kumar Abhishek , Saeed Izadi , Ghassan Hamarneh

Background and objective: The usage of machine learning in medical diagnosis and treatment has witnessed significant growth in recent years through the development of computer-aided diagnosis systems that are often relying on annotated…

Computer Vision and Pattern Recognition · Computer Science 2023-08-17 Mateja Napravnik , Franko Hržić , Sebastian Tschauner , Ivan Štajduhar

Recent advances in deep learning algorithms have led to significant benefits for solving many medical image analysis problems. Training deep learning models commonly requires large datasets with expert-labeled annotations. However,…

Computer Vision and Pattern Recognition · Computer Science 2023-09-19 Banafshe Felfeliyan , Abhilash Hareendranathan , Gregor Kuntze , Stephanie Wichuk , Nils D. Forkert , Jacob L. Jaremko , Janet L. Ronsky

Most of the state-of-the-art semantic segmentation reported in recent years is based on fully supervised deep learning in the medical domain. How?ever, the high-quality annotated datasets require intense labor and domain knowledge,…

Image and Video Processing · Electrical Eng. & Systems 2022-04-25 Pingping Dai , Haiming Zhu , Shuang Ge , Ruihan Zhang , Xiang Qian , Xi Li , Kehong Yuan

Large annotated datasets are vital for training segmentation models, but pixel-level labeling is time-consuming, error-prone, and often requires scarce expert annotators, especially in medical imaging. In contrast, coarse annotations are…

Computer Vision and Pattern Recognition · Computer Science 2025-08-27 Le Zhang , Fuping Wu , Arun Thirunavukarasu , Kevin Bronik , Thomas Nichols , Bartlomiej W. Papiez

Producing densely annotated data is a difficult and tedious task for medical imaging applications. To address this problem, we propose a novel approach to generate supervision for semi-supervised semantic segmentation. We argue that…

Image and Video Processing · Electrical Eng. & Systems 2022-10-10 Constantin Seibold , Simon Reiß , Jens Kleesiek , Rainer Stiefelhagen

Pixel-level crack segmentation is widely studied due to its high impact on building and road inspections. While recent studies have made significant improvements in accuracy, they typically heavily depend on pixel-level crack annotations,…

Computer Vision and Pattern Recognition · Computer Science 2022-11-28 Yuki Inoue , Hiroto Nagayoshi

Medical image segmentation requires consensus ground truth segmentations to be derived from multiple expert annotations. A novel approach is proposed that obtains consensus segmentations from experts using graph cuts (GC) and semi…

Computer Vision and Pattern Recognition · Computer Science 2018-05-22 Dwarikanath Mahapatra