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Molecular simulation trajectories represent high-dimensional data. Such data can be visualized by methods of dimensionality reduction. Non-linear dimensionality reduction methods are likely to be more efficient than linear ones due to the…

Chemical Physics · Physics 2020-08-24 Vojtěch Spiwok , Pavel Kříž

In data stream clustering, systematic theory of stream clustering algorithms remains relatively scarce. Recently, density-based methods have gained attention. However, existing algorithms struggle to simultaneously handle arbitrarily…

Machine Learning · Computer Science 2026-05-07 Qifen Zeng , Haomin Bao , Yuanzhuo Hu , Zirui Zhang , Yuheng Zheng , Luosheng Wen

We extend a well-known dimension reduction method, t-distributed stochastic neighbor embedding (t-SNE), from non-parametric to parametric by training neural networks. The main advantage of a parametric technique is the generalization of…

Machine Learning · Computer Science 2020-10-01 Chien-Hsun Lai , Yu-Shuen Wang

Dimensionality reduction techniques aim at representing high-dimensional data in low-dimensional spaces to extract hidden and useful information or facilitate visual understanding and interpretation of the data. However, few of them take…

Machine Learning · Computer Science 2022-10-25 Yan Sun , Yi Han , Jicong Fan

In this paper we propose a new approach for Big Data mining and analysis. This new approach works well on distributed datasets and deals with data clustering task of the analysis. The approach consists of two main phases, the first phase…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-05 Malika Bendechache , Nhien-An Le-Khac , M-Tahar Kechadi

We study the problem of visualizing large-scale and high-dimensional data in a low-dimensional (typically 2D or 3D) space. Much success has been reported recently by techniques that first compute a similarity structure of the data points…

Machine Learning · Computer Science 2016-04-06 Jian Tang , Jingzhou Liu , Ming Zhang , Qiaozhu Mei

Scaling CNN training is necessary to keep up with growing datasets and reduce training time. We also see an emerging need to handle datasets with very large samples, where memory requirements for training are large. Existing training…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-18 Nikoli Dryden , Naoya Maruyama , Tom Benson , Tim Moon , Marc Snir , Brian Van Essen

Subspace clustering refers to the problem of clustering high-dimensional data points into a union of low-dimensional linear subspaces, where the number of subspaces, their dimensions and orientations are all unknown. In this paper, we…

Machine Learning · Statistics 2014-03-17 Reinhard Heckel , Eirikur Agustsson , Helmut Bölcskei

Similar to many Machine Learning models, both accuracy and speed of the Cluster weighted models (CWMs) can be hampered by high-dimensional data, leading to previous works on a parsimonious technique to reduce the effect of "Curse of…

Machine Learning · Statistics 2022-08-03 Kehinde Olobatuyi

t-SNE remains one of the most popular embedding techniques for visualizing high-dimensional data. Most standard packages of t-SNE, such as scikit-learn, use the Barnes-Hut t-SNE (BH t-SNE) algorithm for large datasets. However, existing CPU…

Machine Learning · Computer Science 2022-12-23 Narendra Chaudhary , Alexander Pivovar , Pavel Yakovlev , Andrey Gorshkov , Sanchit Misra

Clustering large, mixed data is a central problem in data mining. Many approaches adopt the idea of k-means, and hence are sensitive to initialisation, detect only spherical clusters, and require a priori the unknown number of clusters. We…

Machine Learning · Statistics 2020-11-13 Joshua Tobin , Mimi Zhang

Recently, graph mining approaches have become very popular, especially in domains such as bioinformatics, chemoinformatics and social networks. In this scope, one of the most challenging tasks is frequent subgraph discovery. This task has…

Databases · Computer Science 2016-08-24 Sabeur Aridhi , Laurent d'Orazio , Mondher Maddouri , Engelbert Mephu Nguifo

Estimating the number of clusters and cluster structures in unlabeled, complex, and high-dimensional datasets (like images) is challenging for traditional clustering algorithms. In recent years, a matrix reordering-based algorithm called…

With the recent surge in big data analytics for hyper-dimensional data there is a renewed interest in dimensionality reduction techniques for machine learning applications. In order for these methods to improve performance gains and…

Machine Learning · Computer Science 2023-01-20 J. Derek Tucker , Matthew T. Martinez , Jose M. Laborde

Spectral clustering is one of the most effective clustering approaches that capture hidden cluster structures in the data. However, it does not scale well to large-scale problems due to its quadratic complexity in constructing similarity…

Machine Learning · Computer Science 2019-11-26 Lingfei Wu , Pin-Yu Chen , Ian En-Hsu Yen , Fangli Xu , Yinglong Xia , Charu Aggarwal

Different unsupervised models for dimensionality reduction like PCA, LLE, Shannon's mapping, tSNE, UMAP, etc. work on different principles, hence, they are difficult to compare on the same ground. Although they are usually good for…

Methodology · Statistics 2024-05-10 Subhrajyoty Roy

Research on Graph Structure Learning (GSL) provides key insights for graph-based clustering, yet current methods like Graph Neural Networks (GNNs), Graph Attention Networks (GATs), and contrastive learning often rely heavily on the original…

Machine Learning · Computer Science 2025-05-21 Jingyun Zhang , Hao Peng , Li Sun , Guanlin Wu , Chunyang Liu , Zhengtao Yu

We propose a method to reconstruct and cluster incomplete high-dimensional data lying in a union of low-dimensional subspaces. Exploring the sparse representation model, we jointly estimate the missing data while imposing the intrinsic…

Computer Vision and Pattern Recognition · Computer Science 2017-09-06 João Carvalho , Manuel Marques , João P. Costeira

This research proposes a data segmentation algorithm which combines t-SNE, DBSCAN, and Random Forest classifier to form an end-to-end pipeline that separates data into natural clusters and produces a characteristic profile of each cluster…

Machine Learning · Computer Science 2021-01-14 Timothy DeLise

T-SNE is a well-known approach to embedding high-dimensional data and has been widely used in data visualization. The basic assumption of t-SNE is that the data are non-constrained in the Euclidean space and the local proximity can be…

Machine Learning · Computer Science 2015-08-06 Mian Wang , Dong Wang
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