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We present a functional programming language for specifying constraints over tree-shaped data. The language allows for Haskell-like algebraic data types and pattern matching. Our constraint compiler CO4 translates these programs into…

Programming Languages · Computer Science 2013-05-24 Alexander Bau , Johannes Waldmann

We provide decidability and undecidability results on the model-checking problem for infinite tree structures. These tree structures are built from sequences of elements of infinite relational structures. More precisely, we deal with the…

Logic in Computer Science · Computer Science 2011-11-15 Alex Spelten , Wolfgang Thomas , Sarah Winter

Tree containment problem is a fundamental problem in phylogenetic study, as it is used to verify a network model. It asks whether a given network contain a subtree that resembles a binary tree. The problem is NP-complete in general, even in…

Populations and Evolution · Quantitative Biology 2017-02-15 Andreas Gunawan

Packing graphs is a combinatorial problem where several given graphs are being mapped into a common host graph such that every edge is used at most once. In the planar tree packing problem we are given two trees T1 and T2 on n vertices and…

Computational Geometry · Computer Science 2016-03-28 Markus Geyer , Michael Hoffmann , Michael Kaufmann , Vincent Kusters , Csaba D. Tóth

In this article we use the HW maps to solve arbitrary equations f=0, by providing an effective enumeration of the roots of f, as these project on and at the branches of the HW maps. This is just an enumeration of the projection points…

Complex Variables · Mathematics 2019-07-18 Ioannis Galidakis , Ioannis Papadoperakis

We present a class of linear programming approximations for constrained optimization problems. In the case of mixed-integer polynomial optimization problems, if the intersection graph of the constraints has bounded tree-width our…

Optimization and Control · Mathematics 2016-10-20 Daniel Bienstock , Gonzalo Munoz

The theory of Hubbard trees provides an effective classification of non-linear post-critically finite polynomial maps from \C to itself. This note will extend this classification to the case of maps from a finite union of copies of \C to…

Dynamical Systems · Mathematics 2009-09-25 Alfredo Poirier

This paper contributes to the solution of the Poincare problem, which is to bound the degree of a (generalized algebraic) leaf of a (singular algebraic) foliation of the complex projective plane. The first theorem gives a new sort of bound,…

Algebraic Geometry · Mathematics 2007-05-23 E. Esteves , S. Kleiman

We study vertex-ordering problems in loop-free digraphs subject to constraints on the left-going arcs, focusing on existence conditions and computational complexity. As an intriguing special case, we explore vertex-specific lower and upper…

Combinatorics · Mathematics 2025-09-08 Nóra A. Borsik , Péter Madarasi

Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…

Quantitative Methods · Quantitative Biology 2016-03-08 Cedric Chauve , Julien Courtiel , Yann Ponty

The Horton-Strahler (HS) index $r=\max{(i,j)}+\delta_{i,j}$ has been shown to be relevant to a number of physical (such at diffusion limited aggregation) geological (river networks), biological (pulmonary arteries, blood vessels, various…

Statistical Mechanics · Physics 2009-11-07 Z. Toroczkai

The dynamical phenomena of complex networks are very difficult to predict from local information due to the rich microstructures and corresponding complex dynamics. On the other hands, it is a horrible job to compute some stochastic…

Data Structures and Algorithms · Computer Science 2016-01-08 Bing Yao , Xia Liu , Jin Xu

Given an edge-weighted tree $T$ with $n$ leaves, sample the leaves uniformly at random without replacement and let $W_k$, $2 \le k \le n$, be the length of the subtree spanned by the first $k$ leaves. We consider the question, "Can $T$ be…

Combinatorics · Mathematics 2015-06-04 Steven N. Evans , Daniel Lanoue

Hash codes are a very efficient data representation needed to be able to cope with the ever growing amounts of data. We introduce a random forest semantic hashing scheme with information-theoretic code aggregation, showing for the first…

Computer Vision and Pattern Recognition · Computer Science 2015-04-20 Qiang Qiu , Guillermo Sapiro , Alex Bronstein

The hierarchical and recursive expressive capability of rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. On the other hand, such hierarchical…

Machine Learning · Computer Science 2022-01-25 Yuta Nakahara , Shota Saito , Akira Kamatsuka , Toshiyasu Matsushima

We consider special cases of the two tree degree sequences problem. We show that if two tree degree sequences do not have common leaves then they always have edge-disjoint caterpillar realizations. By using a probabilistic method, we prove…

Combinatorics · Mathematics 2017-04-25 Kristóf Bérczi , Zoltán Király , Changshuo Liu , István Miklós

Fekete's lemma is a well known result from combinatorial mathematics that shows the existence of a limit value related to super- and subadditive sequences of real numbers. In this paper, we analyze Fekete's lemma in view of the arithmetical…

Information Theory · Computer Science 2024-09-02 Holger Boche , Yannik Böck , Christian Deppe

We study the inverse problem of recovering a tree graph together with the weights on its edges (equivalently a metric tree) from the knowledge of the Dirichlet-to-Neumann matrix associated with the Laplacian. We prove an explicit formula…

Mathematical Physics · Physics 2021-04-05 Hannes Gernandt , Jonathan Rohleder

We here investigate on the complexity of computing the \emph{tree-length} and the \emph{tree-breadth} of any graph $G$, that are respectively the best possible upper-bounds on the diameter and the radius of the bags in a tree decomposition…

Computational Complexity · Computer Science 2016-01-11 Guillaume Ducoffe , Sylvain Legay , Nicolas Nisse

In this paper, we consider the knot matching problem arising in computational forestry. The knot matching problem is an important problem that needs to be solved to advance the state of the art in automatic strength prediction of lumber. We…

Applications · Statistics 2017-08-28 Seong-Hwan Jun , Samuel W. K. Wong , James V. Zidek , Alexandre Bouchard-Côté