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While there is increasing concern about the interpretability of neural models, the evaluation of interpretability remains an open problem, due to the lack of proper evaluation datasets and metrics. In this paper, we present a novel…

Computation and Language · Computer Science 2022-11-16 Lijie Wang , Yaozong Shen , Shuyuan Peng , Shuai Zhang , Xinyan Xiao , Hao Liu , Hongxuan Tang , Ying Chen , Hua Wu , Haifeng Wang

Saliency detection is one of the most challenging problems in image analysis and computer vision. Many approaches propose different architectures based on the psychological and biological properties of the human visual attention system.…

Computer Vision and Pattern Recognition · Computer Science 2022-12-05 Fateme Mostafaie , Zahra Nabizadeh , Nader Karimi , Shadrokh Samavi

User simulation is a valuable methodology for evaluation in Information Retrieval (IR), enabling low-cost experimentation and counterfactual analysis. However, existing simulation frameworks are primarily code-centric libraries that require…

Information Retrieval · Computer Science 2026-04-28 Saber Zerhoudi , Adam Roegiest , Michael Granitzer

The performance of convolutional neural networks has continued to improve over the last decade. At the same time, as model complexity grows, it becomes increasingly more difficult to explain model decisions. Such explanations may be of…

Computer Vision and Pattern Recognition · Computer Science 2023-03-28 Colton Crum , Patrick Tinsley , Aidan Boyd , Jacob Piland , Christopher Sweet , Timothy Kelley , Kevin Bowyer , Adam Czajka

Machine learning is currently undergoing an explosion in capability, popularity, and sophistication. However, one of the major barriers to widespread acceptance of machine learning (ML) is trustworthiness: most ML models operate as black…

Compilers are essential for the performance and correct execution of software and hold universal relevance across various scientific disciplines. Despite this, there is a notable lack of tools for testing and evaluating them, especially…

Programming Languages · Computer Science 2026-01-06 Berke Ates , Filip Dobrosavljević , Theodoros Theodoridis , Zhendong Su

Software testing is crucial for ensuring the correctness and reliability of software systems. Automated generation of issue reproduction tests from natural language issue descriptions enhances developer productivity by simplifying root…

Software Engineering · Computer Science 2026-01-21 Aditya Bharat Soni , Rajat Ghosh , Vaishnavi Bhargava , Valerie Chen , Debojyoti Dutta

Automated scientific discovery with large language models is transforming the research lifecycle from ideation to experimentation, yet existing agents struggle to autonomously process raw data collected from scientific experiments. We…

Artificial Intelligence · Computer Science 2026-04-29 Ke Lin , Yilin Lu , Shreyas Bhat , Xuehang Guo , Junier Oliva , Qingyun Wang

The AI Steerability 360 toolkit is an extensible, open-source Python library for steering LLMs. Steering abstractions are designed around four model control surfaces: input (modification of the prompt), structural (modification of the…

In drug-discovery-related tasks such as virtual screening, machine learning is emerging as a promising way to predict molecular properties. Conventionally, molecular fingerprints (numerical representations of molecules) are calculated…

Machine Learning · Computer Science 2019-11-13 Shion Honda , Shoi Shi , Hiroki R. Ueda

Just like the scientific data they generate, simulation workflows for research should be findable, accessible, interoperable, and reusable (FAIR). However, while significant progress has been made towards FAIR data, the majority of science…

Digital Libraries · Computer Science 2022-05-04 Martin Hunt , Steven Clark , Daniel Mejia , Saaketh Desai , Alejandro Strachan

In this work we develop a fast saliency detection method that can be applied to any differentiable image classifier. We train a masking model to manipulate the scores of the classifier by masking salient parts of the input image. Our model…

Machine Learning · Statistics 2017-05-23 Piotr Dabkowski , Yarin Gal

SMLP: Symbolic Machine Learning Prover an open source tool for exploration and optimization of systems represented by machine learning models. SMLP uses symbolic reasoning for ML model exploration and optimization under verification and…

Machine Learning · Computer Science 2024-05-17 Franz Brauße , Zurab Khasidashvili , Konstantin Korovin

We introduce SoftTiger, a clinical large language model (CLaM) designed as a foundation model for healthcare workflows. The narrative and unstructured nature of clinical notes is a major obstacle for healthcare intelligentization. We…

Computation and Language · Computer Science 2024-08-21 Ye Chen , Igor Couto , Wei Cai , Cong Fu , Bruno Dorneles

We introduce Merlion, an open-source machine learning library for time series. It features a unified interface for many commonly used models and datasets for anomaly detection and forecasting on both univariate and multivariate time series,…

We introduce SciWING, an open-source software toolkit which provides access to pre-trained models for scientific document processing tasks, inclusive of citation string parsing and logical structure recovery. SciWING enables researchers to…

Digital Libraries · Computer Science 2020-10-26 Abhinav Ramesh Kashyap , Min-Yen Kan

The simplified molecular-input line-entry system (SMILES) is the most popular representation of chemical compounds. Therefore, many SMILES-based molecular property prediction models have been developed. In particular, transformer-based…

Quantitative Methods · Quantitative Biology 2022-05-03 Ingoo Lee , Hojung Nam

The Simulation Environment for Atomistic and Molecular Modeling (SEAMM) is an open-source software package written in Python that provides a graphical interface for setting up, executing, and analyzing molecular and materials simulations.…

EEG-based emotion recognition (EER) has gained significant attention due to its potential for understanding and analyzing human emotions. While recent advancements in deep learning techniques have substantially improved EER, the field lacks…

Human-Computer Interaction · Computer Science 2025-07-23 Huan Liu , Shusen Yang , Yuzhe Zhang , Mengze Wang , Fanyu Gong , Chengxi Xie , Guanjian Liu , Zejun Liu , Yong-Jin Liu , Bao-Liang Lu , Dalin Zhang

Tensors (also commonly seen as multi-linear operators or as multi-dimensional arrays) are ubiquitous in scientific computing and in data science, and so are the software efforts for tensor operations. Particularly in recent years, we have…

Mathematical Software · Computer Science 2022-06-30 Christos Psarras , Lars Karlsson , Jiajia Li , Paolo Bientinesi