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We investigate partitioning of integer sequences into heapable subsequences (previously defined and established by Mitzenmacher et al). We show that an extension of patience sorting computes the decomposition into a minimal number of…

Combinatorics · Mathematics 2015-02-11 Gabriel Istrate , Cosmin Bonchis

Connection matrices are a generalization of Morse boundary operators from the classical Morse theory for gradient vector fields. Developing an efficient computational framework for connection matrices is particularly important in the…

Algebraic Topology · Mathematics 2023-09-26 Tamal K. Dey , Michał Lipiński , Marian Mrozek , Ryan Slechta

Homomorphic permutation is fundamental to privacy-preserving computations based on batch-encoding homomorphic encryption. It underpins nearly all homomorphic matrix operations and predominantly influences their complexity. Permutation…

Cryptography and Security · Computer Science 2025-11-27 Xirong Ma , Junling Fang , Chunpeng Ge , Dung Hoang Duong , Yali Jiang , Yanbin Li , Willy Susilo , Lizhen Cui

In data clustering, it is often desirable to find not just a single partition into clusters but a sequence of partitions that describes the data at different scales (or levels of coarseness). A natural problem then is to analyse and compare…

Algebraic Topology · Mathematics 2025-04-25 Juni Schindler , Mauricio Barahona

Many tasks in data mining and related fields can be formalized as matching between objects in two heterogeneous domains, including collaborative filtering, link prediction, image tagging, and web search. Machine learning techniques,…

Machine Learning · Computer Science 2014-10-24 Jingbo Shang , Tianqi Chen , Hang Li , Zhengdong Lu , Yong Yu

Maintaining the pair similarity relationship among originally high-dimensional data into a low-dimensional binary space is a popular strategy to learn binary codes. One simiple and intutive method is to utilize two identical code matrices…

Information Retrieval · Computer Science 2018-11-28 Xiaoshuang Shi , Fuyong Xing , Zizhao Zhang , Manish Sapkota , Zhenhua Guo , Lin Yang

Information networks are becoming increasingly popular to capture complex relationships across various disciplines, such as social networks, citation networks, and biological networks. The primary challenge in this domain is measuring…

Algebraic Topology · Mathematics 2019-07-23 Mehmet Emin Aktas , Esra Akbas , Ahmed El Fatmaoui

Most algorithms for computing persistent homology do so by tracking cycles that represent homology classes. There are many choices of such cycles, and specific choices have found different uses in applications. Although it is known that…

Algebraic Topology · Mathematics 2025-04-01 Dmitriy Morozov , Primoz Skraba

Clustering, a fundamental activity in unsupervised learning, is notoriously difficult when the feature space is high-dimensional. Fortunately, in many realistic scenarios, only a handful of features are relevant in distinguishing clusters.…

Machine Learning · Statistics 2020-10-23 Zhiyue Zhang , Kenneth Lange , Jason Xu

Clustering samples according to an effective metric and/or vector space representation is a challenging unsupervised learning task with a wide spectrum of applications. Among several clustering algorithms, k-means and its kernelized version…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-10-10 Marco Jacopo Ferrarotti , Sergio Decherchi , Walter Rocchia

Tumor segmentation in whole-slide images of histology slides is an important step towards computer-assisted diagnosis. In this work, we propose a tumor segmentation framework based on the novel concept of persistent homology profiles…

Computer Vision and Pattern Recognition · Computer Science 2018-05-11 Talha Qaiser , Yee-Wah Tsang , Daiki Taniyama , Naoya Sakamoto , Kazuaki Nakane , David Epstein , Nasir Rajpoot

Hierarchical clustering (HC) algorithms are generally limited to small data instances due to their runtime costs. Here we mitigate this shortcoming and explore fast HC algorithms based on random projections for single (SLC) and average…

Information Retrieval · Computer Science 2014-01-24 Johannes Schneider , Michail Vlachos

A quantized message passing decoding algorithm for low-density parity-check codes is presented. The algorithm relies on the min approximation at the check nodes, and on modelling the variable node inbound messages as observations of an…

Information Theory · Computer Science 2021-01-01 Emna Ben Yacoub

Nearest neighbor search is a problem of finding the data points from the database such that the distances from them to the query point are the smallest. Learning to hash is one of the major solutions to this problem and has been widely…

Computer Vision and Pattern Recognition · Computer Science 2017-04-25 Jingdong Wang , Ting Zhang , Jingkuan Song , Nicu Sebe , Heng Tao Shen

In the compressive learning theory, instead of solving a statistical learning problem from the input data, a so-called sketch is computed from the data prior to learning. The sketch has to capture enough information to solve the problem…

Machine Learning · Statistics 2019-10-23 Michael P. Sheehan , Antoine Gonon , Mike E. Davies

Image segmentation is an important component of many image understanding systems. It aims to group pixels in a spatially and perceptually coherent manner. Typically, these algorithms have a collection of parameters that control the degree…

Computer Vision and Pattern Recognition · Computer Science 2018-02-02 Marc Bosch , Christopher M. Gifford , Austin G. Dress , Clare W. Lau , Jeffrey G. Skibo , Gordon A. Christie

Modern-day neural networks are famously large, yet also highly redundant and compressible; there exist numerous pruning strategies in the deep learning literature that yield over 90% sparser sub-networks of fully-trained, dense…

Machine Learning · Computer Science 2022-06-20 Aishwarya Balwani , Jakob Krzyston

We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga

Algorithms for persistent homology and zigzag persistent homology are well-studied for persistence modules where homomorphisms are induced by inclusion maps. In this paper, we propose a practical algorithm for computing persistence under…

Computational Geometry · Computer Science 2014-03-26 Tamal K. Dey , Fengtao Fan , Yusu Wang

A hypergraph can be obtained from a simplicial complex by deleting some non-maximal simplices. By [11], a hypergraph gives an associated simplicial complex. By [4], the embedded homology of a hypergraph is the homology of the infimum chain…

Algebraic Topology · Mathematics 2020-06-04 Shiquan Ren , Chong Wang , Chengyuan Wu , Jie Wu