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As researchers collect increasingly large molecular data sets to reconstruct the Tree of Life, the heterogeneity of signals in the genomes of diverse organisms poses challenges for traditional phylogenetic analysis. A class of phylogenetic…

Populations and Evolution · Quantitative Biology 2015-09-11 Liang Liu , Zhenxiang Xi , Shaoyuan Wu , Charles Davis , Scott V. Edwards

Supervised machine learning often encounters concept drift, where the data distribution changes over time, degrading model performance. Existing drift detection methods focus on identifying these shifts but often overlook the challenge of…

Machine Learning · Computer Science 2024-11-06 Christofer Fellicious , Lorenz Wendlinger , Mario Gancarski , Jelena Mitrovic , Michael Granitzer

Heteroscedasticity -- where the variance of a variable changes with other variables -- is pervasive in real data, and elucidating why it arises from the perspective of statistical moments is crucial in scientific knowledge discovery and…

Machine Learning · Statistics 2026-05-28 Yoichi Chikahara

Recent results in coupled or temporal graphical models offer schemes for estimating the relationship structure between features when the data come from related (but distinct) longitudinal sources. A novel application of these ideas is for…

Machine Learning · Statistics 2017-11-22 Ronak Mehta , Hyunwoo J. Kim , Shulei Wang , Sterling C. Johnson , Ming Yuan , Vikas Singh

When a subgroup is identified from the data, it must be evaluated in a replicable way. The usual in-sample approach, which evaluates the post-hoc identified subgroup as predefined, might suffer from selection bias. This issue of in-sample…

Methodology · Statistics 2026-05-06 Shuoxun Xu , Xinzhou Guo

Generative adversarial networks (GANs) have recently become a popular data augmentation technique used by machine learning practitioners. However, they have been shown to suffer from the so-called mode collapse failure mode, which makes…

Machine Learning · Computer Science 2023-08-29 Denis Liu

We develop a Bayesian bivariate spatial model for multivariate regression analysis applicable to studies examining the influence of genetic variation on brain structure. Our model is motivated by an imaging genetics study of the Alzheimer's…

Methodology · Statistics 2020-05-26 Yin Song , Shufei Ge , Jiguo Cao , Liangliang Wang , Farouk S. Nathoo

We evaluate a co-evolutionary calibration framework for the Heston model in which a genetic algorithm (GA) over parameters is coupled to an evolving neural inverse map from option surfaces to parameters. While GA-history sampling can reduce…

Pricing of Securities · Quantitative Finance 2025-12-04 Julian Gutierrez

Traditional GWAS has advanced our understanding of complex diseases but often misses nonlinear genetic interactions. Deep learning offers new opportunities to capture complex genomic patterns, yet existing methods mostly depend on feature…

Machine Learning · Computer Science 2025-07-08 Iqra Farooq , Sara Atito , Ayse Demirkan , Inga Prokopenko , Muhammad Rana

In recent years, data selection has emerged as a core issue for large-scale visual-language model pretraining, especially on noisy web-curated datasets. One widely adopted strategy assigns quality scores such as CLIP similarity for each…

Machine Learning · Computer Science 2024-02-06 Yiping Wang , Yifang Chen , Wendan Yan , Kevin Jamieson , Simon Shaolei Du

Although face recognition has made impressive progress in recent years, we ignore the racial bias of the recognition system when we pursue a high level of accuracy. Previous work found that for different races, face recognition networks…

Computer Vision and Pattern Recognition · Computer Science 2023-04-06 Linzhi Huang , Mei Wang , Jiahao Liang , Weihong Deng , Hongzhi Shi , Dongchao Wen , Yingjie Zhang , Jian Zhao

In this paper, to unveil interpretable development-specific gene signatures in human PFC, we propose a novel gene selection method, named Interpretable Causality Gene Selection (ICGS), which adopts a Bayesian Network (BN) to represent…

Neurons and Cognition · Quantitative Biology 2022-11-18 Meng Huang , Xiucai Ye , Tetsuya Sakurai

Recently, it has been exposed that some modern facial recognition systems could discriminate specific demographic groups and may lead to unfair attention with respect to various facial attributes such as gender and origin. The main reason…

Computer Vision and Pattern Recognition · Computer Science 2023-09-18 Parsa Rahimi , Christophe Ecabert , Sebastien Marcel

Variable selection is of increasing importance to address the difficulties of high dimensionality in many scientific areas. In this paper, we demonstrate a property for distance covariance, which is incorporated in a novel feature screening…

Methodology · Statistics 2014-09-03 Jing Kong , Sijian Wang , Grace Wahba

Scientific discovery in digital health requires converting continuous physiological signals from wearable devices into clinically actionable biomarkers. We introduce CoDaS (AI Co-Data-Scientist), a multi-agent system that structures…

Machine learning model bias can arise from dataset composition: correlated sensitive features can distort the downstream classification model's decision boundary and lead to performance differences along these features. Existing de-biasing…

Computer Vision and Pattern Recognition · Computer Science 2025-01-22 Miao Zhang , Zee fryer , Ben Colman , Ali Shahriyari , Gaurav Bharaj

A comprehensive methodology for inference in vector autoregressions (VARs) using sign and other structural restrictions is developed. The reduced-form VAR disturbances are driven by a few common factors and structural identification…

Econometrics · Economics 2022-06-15 Dimitris Korobilis

Several approaches have been developed to mitigate algorithmic bias stemming from health data poverty, where minority groups are underrepresented in training datasets. Augmenting the minority class using resampling (such as SMOTE) is a…

Machine Learning · Computer Science 2022-10-27 Raffaele Marchesi , Nicolo Micheletti , Giuseppe Jurman , Venet Osmani

Revealing relationships between genes and disease phenotypes is a critical problem in biomedical studies. This problem has been challenged by the heterogeneity of diseases. Patients of a perceived same disease may form multiple subgroups,…

Methodology · Statistics 2022-11-30 Yifan Sun , Ziye Luo , Xinyan Fan

Autism spectrum disorder (ASD) is one of the most significant neurological disorders that disrupt a person's social communication skills. The progression and development of neuroimaging technologies has made structural network construction…

Social and Information Networks · Computer Science 2019-11-14 M. Amin , F. Safaei , N. S. Ghaderian
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