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This paper presents the R package gRapHD for efficient selection of high-dimensional undirected graphical models. The package provides tools for selecting trees, forests and decomposable models minimizing information criteria such as AIC or…

Machine Learning · Statistics 2019-09-24 Gabriel C. G. de Abreu , Rodrigo Labouriau , David Edwards

The generalized Ridge penalty is a powerful tool for dealing with overfitting and for high-dimensional regressions. The generalized Ridge regression can be derived as the mean of a posterior distribution with a Normal prior and a given…

Methodology · Statistics 2022-08-10 Said Obakrim , Pierre Ailliot , Valérie Monbet , Nicolas Raillard

The R package knnwtsim provides functions to implement k nearest neighbors (KNN) forecasting using a similarity metric tailored to the forecasting problem of predicting future observations of a response series where recent observations,…

Methodology · Statistics 2021-12-14 Matthew Trupiano

The rstap package implements Bayesian spatial temporal aggregated predictor models in R using the probabilistic programming language Stan. A variety of distributions and link functions are supported, allowing users to fit this extension to…

Methodology · Statistics 2018-12-27 Adam Peterson , Brisa Sanchez

Multiplicative mixed models can be applied in a wide range of scientific disciplines, since they are relevant in every situation where an interaction between a fixed effect and a random effect is present. Until now, no R package has been…

Computation · Statistics 2018-11-05 Sofie Pødenphant , Kasper Kristensen , Per B. Brockhoff

We study the problem of learning a directed acyclic graph from data generated according to an additive, non-linear structural equation model with Gaussian noise. We express each non-linear function through a basis expansion, and derive a…

Methodology · Statistics 2025-11-27 Xiaozhu Zhang , Nir Keret , Ali Shojaie , Armeen Taeb

An approximate formulation of a robust geometric program (RGP) as a convex program is proposed. Interest in using geometric programs (GPs) to model complex engineering systems has been growing, and this has motivated explicitly modeling the…

Optimization and Control · Mathematics 2018-08-23 Ali Saab , Edward Burnell , Warren W. Hoburg

Graphical models provide powerful tools to uncover complicated patterns in multivariate data and are commonly used in Bayesian statistics and machine learning. In this paper, we introduce the R package BDgraph which performs Bayesian…

Machine Learning · Statistics 2019-05-14 Reza Mohammadi , Ernst C. Wit

We introduce a framework, which we denote as the augmented estimate sequence, for deriving fast algorithms with provable convergence guarantees. We use this framework to construct a new first-order scheme, the Accelerated Composite Gradient…

Optimization and Control · Mathematics 2019-04-24 Mihai I. Florea , Sergiy A. Vorobyov

Regularization has become a primary tool for developing reliable estimators of the covariance matrix in high-dimensional settings. To curb the curse of dimensionality, numerous methods assume that the population covariance (or inverse…

Methodology · Statistics 2018-02-19 Jacob Bien

CensSpatial is an R package for analyzing spatial censored data through linear models. It offers a set of tools for simulating, estimating, making predictions, and performing local influence diagnostics for outlier detection. The package…

Methodology · Statistics 2021-10-13 Jose A. Ordonez , Christian E. Galarza , Victor H. Lachos

The parallel alternating direction method of multipliers (ADMM) algorithm is widely recognized for its effectiveness in handling large-scale datasets stored in a distributed manner, making it a popular choice for solving statistical…

Machine Learning · Statistics 2023-11-22 Xiaofei Wu , Zhimin Zhang , Zhenyu Cui

The R package abn is designed to fit additive Bayesian models to observational datasets. It contains routines to score Bayesian networks based on Bayesian or information theoretic formulations of generalized linear models. It is equipped…

Machine Learning · Statistics 2019-11-21 Gilles Kratzer , Fraser Iain Lewis , Arianna Comin , Marta Pittavino , Reinhard Furrer

This article introduces the pammtools package, which facilitates data transformation, estimation and interpretation of Piece-wise exponential Additive Mixed Models. A special focus is on time-varying effects and cumulative effects of…

Computation · Statistics 2018-06-05 Andreas Bender , Fabian Scheipl

Projection-based model reduction is among the most widely adopted methods for constructing parametric Reduced-Order Models (ROM). Utilizing the snapshot data from solving full-order governing equations, the Proper Orthogonal Decomposition…

Machine Learning · Statistics 2025-09-16 Xiao Liu , Jingyi Feng , Xinchao Liu

Astronomical data is often uncertain with errors that are heteroscedastic (different for each data point) and covariant between different dimensions. Assuming that a set of D-dimensional data points can be described by a (D - 1)-dimensional…

Instrumentation and Methods for Astrophysics · Physics 2015-10-21 A. S. G. Robotham , D. Obreschkow

Background. The bootComb R package allows researchers to derive confidence intervals with correct target coverage for arbitrary combinations of arbitrary numbers of independently estimated parameters. Previous versions (< 1.1.0) of bootComb…

Methodology · Statistics 2022-10-03 Marc Yves Romain Henrion

Regularized regression models are well studied and, under appropriate conditions, offer fast and statistically interpretable results. However, large data in many applications are heterogeneous in the sense of harboring distributional…

Methodology · Statistics 2022-10-25 Konstantinos Perrakis , Thomas Lartigue , Frank Dondelinger , Sach Mukherjee

We develop an encompassing framework for matching, covariate balancing, and doubly-robust methods for causal inference from observational data called generalized optimal matching (GOM). The framework is given by generalizing a new…

Machine Learning · Statistics 2017-10-30 Nathan Kallus

Conditional Generative Adversarial Networks (cGANs) are implicit generative models which allow to sample from class-conditional distributions. Existing cGANs are based on a wide range of different discriminator designs and training…

Computer Vision and Pattern Recognition · Computer Science 2021-11-02 Si-An Chen , Chun-Liang Li , Hsuan-Tien Lin
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