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Recently, nonnegative matrix factorization (NMF) has been widely adopted for community detection, because of its better interpretability. However, the existing NMF-based methods have the following three problems: 1) they directly transform…

Machine Learning · Computer Science 2024-02-15 Yuecheng Li , Jialong Chen , Chuan Chen , Lei Yang , Zibin Zheng

Spectral unmixing is an important tool in hyperspectral data analysis for estimating endmembers and abundance fractions in a mixed pixel. This paper examines the applicability of a recently developed algorithm called graph regularized…

Computer Vision and Pattern Recognition · Computer Science 2011-11-04 Roozbeh Rajabi , Mahdi Khodadadzadeh , Hassan Ghassemian

In this paper we explore avenues for improving the reliability of dimensionality reduction methods such as Non-Negative Matrix Factorization (NMF) as interpretive exploratory data analysis tools. We first explore the difficulties of the…

Artificial Intelligence · Computer Science 2009-04-22 Nikolaos Vasiloglou , Alexander G. Gray , David V. Anderson

Over the past few years, there has been a considerable spread of microarray technology in many biological patterns, particularly in those pertaining to cancer diseases like leukemia, prostate, colon cancer, etc. The primary bottleneck that…

Quantitative Methods · Quantitative Biology 2020-07-20 Parth Patel , Kalpdrum Passi , Chakresh Kumar Jain

Nowadays, the availability of large-scale data in disparate application domains urges the deployment of sophisticated tools for extracting valuable knowledge out of this huge bulk of information. In that vein, low-rank representations…

Machine Learning · Computer Science 2017-10-06 Paris V. Giampouras , Athanasios A. Rontogiannis , Konstantinos D. Koutroumbas

Boolean matrix factorization (BMF) approximates a given binary input matrix as the product of two smaller binary factors. As opposed to binary matrix factorization which uses standard arithmetic, BMF uses the Boolean OR and Boolean AND…

Optimization and Control · Mathematics 2023-05-18 Christos Kolomvakis , Arnaud Vandaele , Nicolas Gillis

A novel method for estimating Bayesian network (BN) parameters from data is presented which provides improved performance on test data. Previous research has shown the value of representing conditional probability distributions (CPDs) via…

Machine Learning · Computer Science 2013-01-14 Geoff A. Jarrad

This paper provides a theoretical explanation on the clustering aspect of nonnegative matrix factorization (NMF). We prove that even without imposing orthogonality nor sparsity constraint on the basis and/or coefficient matrix, NMF still…

Machine Learning · Computer Science 2010-06-15 Andri Mirzal , Masashi Furukawa

We propose several new models for semi-supervised nonnegative matrix factorization (SSNMF) and provide motivation for SSNMF models as maximum likelihood estimators given specific distributions of uncertainty. We present multiplicative…

Matrix factorization methods are linear models, with limited capability to model complex relations. In our work, we use tropical semiring to introduce non-linearity into matrix factorization models. We propose a method called Sparse…

Machine Learning · Computer Science 2021-04-20 Amra Omanović , Hilal Kazan , Polona Oblak , Tomaž Curk

We present a new probabilistic model to address semi-nonnegative matrix factorization (SNMF), called Skellam-SNMF. It is a hierarchical generative model consisting of prior components, Skellam-distributed hidden variables and observed data.…

Machine Learning · Computer Science 2021-07-08 Benoit Fuentes , Gaël Richard

Matrix factorization methods - including Factor analysis (FA), and Principal Components Analysis (PCA) - are widely used for inferring and summarizing structure in multivariate data. Many matrix factorization methods exist, corresponding to…

Methodology · Statistics 2021-05-04 Wei Wang , Matthew Stephens

A gamma process dynamic Poisson factor analysis model is proposed to factorize a dynamic count matrix, whose columns are sequentially observed count vectors. The model builds a novel Markov chain that sends the latent gamma random variables…

Machine Learning · Statistics 2015-12-31 Ayan Acharya , Joydeep Ghosh , Mingyuan Zhou

The application of binary matrices are numerous. Representing a matrix as a mixture of a small collection of latent vectors via low-rank decomposition is often seen as an advantageous method to interpret and analyze data. In this work, we…

Numerical Analysis · Mathematics 2021-11-03 Derek DeSantis , Erik Skau , Duc P. Truong , Boian Alexandrov

Nonnegative matrix factorization (NMF), a dimensionality reduction and factor analysis method, is a special case in which factor matrices have low-rank nonnegative constraints. Considering the stochastic learning in NMF, we specifically…

Numerical Analysis · Computer Science 2018-04-05 Hiroyuki Kasai

In this article, we study algorithms for nonnegative matrix factorization (NMF) in various applications involving streaming data. Utilizing the continual nature of the data, we develop a fast two-stage algorithm for highly efficient and…

Optimization and Control · Mathematics 2021-01-22 Ran Gu , Qiang Du , Simon J. L. Billinge

Pattern-mixture models provide a transparent approach for handling missing data, where the full-data distribution is factorized in a way that explicitly shows the parts that can be estimated from observed data alone, and the parts that…

Methodology · Statistics 2019-04-26 Yen-Chi Chen , Mauricio Sadinle

We present here an original application of the non-negative matrix factorization (NMF) method, for the case of extra-financial data. These data are subject to high correlations between co-variables, as well as between observations. NMF…

Computational Finance · Quantitative Finance 2022-06-10 P Fogel , C Geissler , P Cotte , G Luta

Matrix factorization techniques have been widely used as a method for collaborative filtering for recommender systems. In recent times, different variants of deep learning algorithms have been explored in this setting to improve the task of…

Machine Learning · Computer Science 2019-03-26 Vaibhav Krishna , Tian Guo , Nino Antulov-Fantulin

Lee and Seung (2000) introduced numerical solutions for non-negative matrix factorization (NMF) using iterative multiplicative update algorithms. These algorithms have been actively utilized as dimensionality reduction tools for…

Numerical Analysis · Mathematics 2025-01-23 Sungjae Cho
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