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This tutorial paper refers to the use of graph-theoretic concepts for analyzing brain signals. For didactic purposes it splits into two parts: theory and application. In the first part, we commence by introducing some basic elements from…

Neurons and Cognition · Quantitative Biology 2020-07-14 Nikolaos Laskaris , Dimitrios A. Adamos , Anastasios Bezerianos

In this article we are introducing combinatorial spectra of graphs, this is a generalization of $H$-Hamiltonian spectra. The main motivation was to made from $H$-Hamiltonian spectra an operation and develop some algebra in this field. An…

Combinatorics · Mathematics 2023-11-21 Martin Dzúrik

The interlace polynomials introduced by Arratia, Bollobas and Sorkin extend to invariants of graphs with vertex weights, and these weighted interlace polynomials have several novel properties. One novel property is a version of the…

Combinatorics · Mathematics 2009-06-30 Lorenzo Traldi

We demonstrate how by using a reinforcement learning algorithm, the deep cross-entropy method, one can find explicit constructions and counterexamples to several open conjectures in extremal combinatorics and graph theory. Amongst the…

Combinatorics · Mathematics 2021-04-30 Adam Zsolt Wagner

We apply some basic notions from combinatorial topology to establish various algebraic properties of edge ideals of graphs and more general Stanley-Reisner rings. In this way we provide new short proofs of some theorems from the literature…

Combinatorics · Mathematics 2008-10-23 Anton Dochtermann , Alexander Engstrom

We tackle the network topology inference problem by utilizing Laplacian constrained Gaussian graphical models, which recast the task as estimating a precision matrix in the form of a graph Laplacian. Recent research \cite{ying2020nonconvex}…

Machine Learning · Computer Science 2023-09-06 Jiaxi Ying , Xi Han , Rui Zhou , Xiwen Wang , Hing Cheung So

How can the `affinity' or `strength' of ties of a random graph be characterized and compactly represented? How can concepts like Fourier and inverse-Fourier like transform be developed for graph data? To do so, we introduce a new…

Statistics Theory · Mathematics 2015-12-11 Subhadeep Mukhopadhyay

Much information about a graph can be obtained by studying its spanning trees. On the other hand, a graph can be regarded as a 1-dimensional cell complex, raising the question of developing a theory of trees in higher dimension. As observed…

Combinatorics · Mathematics 2015-06-24 Art M. Duval , Caroline J. Klivans , Jeremy L. Martin

Low density graphs are considered to be a realistic graph class for modelling road networks. It has advantages over other popular graph classes for road networks, such as planar graphs, bounded highway dimension graphs, and spanners. We…

Computational Geometry · Computer Science 2025-10-14 Joachim Gudmundsson , Sampson Wong

We prove a deletion-contraction formula for motivic Feynman rules given by the classes of the affine graph hypersurface complement in the Grothendieck ring of varieties. We derive explicit recursions and generating series for these motivic…

Mathematical Physics · Physics 2012-04-11 Paolo Aluffi , Matilde Marcolli

We give a short proof that every finite graph (or matroid) has a tree-decomposition that displays all maximal tangles. This theorem for graphs is a central result of the graph minors project of Robertson and Seymour and the extension to…

Combinatorics · Mathematics 2016-06-01 Johannes Carmesin

Probabilistic graphical models, such as Markov random fields (MRF), exploit dependencies among random variables to model a rich family of joint probability distributions. Sophisticated inference algorithms, such as belief propagation (BP),…

Social and Information Networks · Computer Science 2020-04-22 Yifei Liu , Chao Chen , Xi Zhang , Sihong Xie

We survey recent advances in the theory of graph and hypergraph decompositions, with a focus on extremal results involving minimum degree conditions. We also collect a number of intriguing open problems, and formulate new ones.

Combinatorics · Mathematics 2021-06-28 Stefan Glock , Daniela Kühn , Deryk Osthus

For a given homogeneous Poisson point process in $\mathbb{R}^d$ two points are connected by an edge if their distance is bounded by a prescribed distance parameter. The behaviour of the resulting random graph, the Gilbert graph or random…

Probability · Mathematics 2017-11-06 Matthias Reitzner , Matthias Schulte , Christoph Thaele

This paper is mainly a semi-tutorial introduction to elementary algebraic topology and its applications to Ising-type models of statistical physics, using graphical models of linear and group codes. It contains new material on systematic…

Information Theory · Computer Science 2018-12-20 G. David Forney

A cut ideal of a graph records the relations among the cuts of the graph. These toric ideals have been introduced by Sturmfels and Sullivant who also posed the problem of relating their properties to the combinatorial structure of the…

Commutative Algebra · Mathematics 2009-04-28 Uwe Nagel , Sonja Petrović

In many areas such as computational biology, finance or social sciences, knowledge of an underlying graph explaining the interactions between agents is of paramount importance but still challenging. Considering that these interactions may…

Signal Processing · Electrical Eng. & Systems 2021-04-29 Mircea Moscu , Ricardo A. Borsoi , Cédric Richard , José-Carlos M. Bermudez

This is a tutorial on tabular parsing, on the basis of tabulation of nondeterministic push-down automata. Discussed are Earley's algorithm, the Cocke-Kasami-Younger algorithm, tabular LR parsing, the construction of parse trees, and further…

Computation and Language · Computer Science 2007-05-23 Mark-Jan Nederhof , Giorgio Satta

This article discusses some recent trends in Ramsey theory on infinite structures. Trees and their Ramsey theory have been vital to these investigations. The main ideas behind the author's recent method of trees with coding nodes are…

Logic · Mathematics 2020-09-10 Natasha Dobrinen

Discovering the underlying structures present in large real world graphs is a fundamental scientific problem. In this paper we show that a graph's clique tree can be used to extract a hyperedge replacement grammar. If we store an ordering…

Social and Information Networks · Computer Science 2016-08-11 Salvador Aguiñaga , Rodrigo Palacios , David Chiang , Tim Weninger