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Causal relation extraction (CRE) is central to biomedical text mining, but current resources often conflate causal relations with broader associations, restrict annotation to sentence-level examples, or focus mainly on explicit causal cues.…

Computation and Language · Computer Science 2026-05-28 Ifeoluwa Kunle-John , Josiah Paul , Oluwatosin Agbaakin , Peter Aina , Ikenna Odezuligbo , Sydney Anuyah

Understanding causal narratives communicated in clinical notes can help make strides towards personalized healthcare. Extracted causal information from clinical notes can be combined with structured EHR data such as patients' demographics,…

Computation and Language · Computer Science 2022-03-15 Vivek Khetan , Md Imbesat Hassan Rizvi , Jessica Huber , Paige Bartusiak , Bogdan Sacaleanu , Andrew Fano

Mining relationships between treatment(s) and medical problem(s) is vital in the biomedical domain. This helps in various applications, such as decision support system, safety surveillance, and new treatment discovery. We propose a deep…

Machine Learning · Computer Science 2018-07-02 Veera Raghavendra Chikka , Kamalakar Karlapalem

Document-level relation extraction (DocRE) poses the challenge of identifying relationships between entities within a document as opposed to the traditional RE setting where a single sentence is input. Existing approaches rely on logical…

Information Retrieval · Computer Science 2024-01-23 Monika Jain , Raghava Mutharaju , Ramakanth Kavuluru , Kuldeep Singh

Emotion classification is often formulated as the task to categorize texts into a predefined set of emotion classes. So far, this task has been the recognition of the emotion of writers and readers, as well as that of entities mentioned in…

Computation and Language · Computer Science 2022-04-12 Enrica Troiano , Laura Oberländer , Maximilian Wegge , Roman Klinger

Relation extraction aims to identify the target relations of entities in texts. Relation extraction is very important for knowledge base construction and text understanding. Traditional binary relation extraction, including supervised,…

Computation and Language · Computer Science 2020-12-10 Haiyun Jiang , Qiaoben Bao , Qiao Cheng , Deqing Yang , Li Wang , Yanghua Xiao

The ability to automatically recognize a person's behavioral context can contribute to health monitoring, aging care and many other domains. Validating context recognition in-the-wild is crucial to promote practical applications that work…

Artificial Intelligence · Computer Science 2017-10-03 Yonatan Vaizman , Katherine Ellis , Gert Lanckriet

Nowadays event extraction systems mainly deal with a relatively small amount of information about temporal and modal qualifications of situations, primarily processing assertive sentences in the past tense. However, systems with a wider…

Computation and Language · Computer Science 2020-08-05 Ali Hürriyetoğlu

Biomedical Question Answering aims to obtain an answer to the given question from the biomedical domain. Due to its high requirement of biomedical domain knowledge, it is difficult for the model to learn domain knowledge from limited…

Computation and Language · Computer Science 2022-06-29 Yuxuan Lu , Jingya Yan , Zhixuan Qi , Zhongzheng Ge , Yongping Du

Automatic text summarization tools help users in biomedical domain to acquire their intended information from various textual resources more efficiently. Some of the biomedical text summarization systems put the basis of their sentence…

Computation and Language · Computer Science 2017-05-31 Milad Moradi , Nasser Ghadiri

Storytelling, whether via fables, news reports, documentaries, or memoirs, can be thought of as the communication of interesting and related events that, taken together, form a concrete process. It is desirable to extract the event chains…

Computation and Language · Computer Science 2021-09-23 Xiyang Zhang , Muhao Chen , Jonathan May

The lack of contextual information in text data can make the annotation process of text-based emotion classification datasets challenging. As a result, such datasets often contain labels that fail to consider all the relevant emotions in…

Computation and Language · Computer Science 2023-11-08 Daniel Yang , Aditya Kommineni , Mohammad Alshehri , Nilamadhab Mohanty , Vedant Modi , Jonathan Gratch , Shrikanth Narayanan

Humans' perception system closely monitors audio-visual cues during multiparty interactions to react timely and naturally. Learning to predict timing and type of reaction responses during human-human interactions may help us to enrich…

Human-Computer Interaction · Computer Science 2022-06-23 Ibrahim Shoer , Berker Turker , Engin Erzin

Predicting undesirable events during the execution of a business process instance provides the process participants with an opportunity to intervene and keep the process aligned with its goals. Few approaches for tackling this challenge…

Artificial Intelligence · Computer Science 2020-09-22 Jens Brunk , Matthias Stierle , Leon Papke , Kate Revoredo , Martin Matzner , Jörg Becker

There is a large number of online documents data sources available nowadays. The lack of structure and the differences between formats are the main difficulties to automatically extract information from them, which also has a negative…

Compared to the general news domain, information extraction (IE) from biomedical text requires much broader domain knowledge. However, many previous IE methods do not utilize any external knowledge during inference. Due to the exponential…

Computation and Language · Computer Science 2021-06-02 Tuan Lai , Heng Ji , ChengXiang Zhai , Quan Hung Tran

Radiology reports contain a diverse and rich set of clinical abnormalities documented by radiologists during their interpretation of the images. Comprehensive semantic representations of radiological findings would enable a wide range of…

Computation and Language · Computer Science 2021-12-28 Wilson Lau , Kevin Lybarger , Martin L. Gunn , Meliha Yetisgen

Causal relations (If A, then B) are prevalent in requirements artifacts. Automatically extracting causal relations from requirements holds great potential for various RE activities (e.g., automatic derivation of suitable test cases).…

Computation and Language · Computer Science 2021-07-23 Noah Jadallah , Jannik Fischbach , Julian Frattini , Andreas Vogelsang

The aim of this paper is to report on a novel text reduction technique, called Text Denoising, that highlights information-rich content when processing a large volume of text data, especially from the biomedical domain. The core feature of…

Information Retrieval · Computer Science 2013-08-02 Rushdi Shams

This paper focuses on a traditional relation extraction task in the context of limited annotated data and a narrow knowledge domain. We explore this task with a clinical corpus consisting of 200 breast cancer follow-up treatment letters in…

Machine Learning · Computer Science 2019-04-25 Jiyu Chen , Karin Verspoor , Zenan Zhai