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Ground and space-based sky surveys enable powerful cosmological probes based on measurements of galaxy properties and the distribution of galaxies in the Universe. These probes include weak lensing, baryon acoustic oscillations, abundance…

Upcoming galaxy surveys will allow us to probe the growth of the cosmic large-scale structure with improved sensitivity compared to current missions, and will also map larger areas of the sky. This means that in addition to the increased…

Cosmology and Nongalactic Astrophysics · Physics 2022-01-31 Matteo Martinelli , Roohi Dalal , Fereshteh Majidi , Yashar Akrami , Stefano Camera , Elena Sellentin

We present a general framework for obtaining robust bounds on the nature of dark matter using cosmological $N$-body simulations and Lyman-alpha forest data. We construct an emulator of hydrodynamical simulations, which is a flexible,…

Cosmology and Nongalactic Astrophysics · Physics 2021-02-23 Keir K. Rogers , Hiranya V. Peiris

The distribution of absorption lines in the spectra of distant quasars, called the Lyman-$\alpha$ (Ly-$\alpha$) forest, is a unique probe of cosmology and the intergalactic medium at high redshifts and small scales. The statistical power of…

Cosmology and Nongalactic Astrophysics · Physics 2025-07-02 Roger de Belsunce , Mikhail M. Ivanov , James M. Sullivan , Kazuyuki Akitsu , Shi-Fan Chen

In this paper we review the importance of the Lyman alpha forest as a probe of structure formation in the universe. We first discuss the statistics used to describe the Lyman alpha forest and the numerical techniques used to produce…

Astrophysics · Physics 2007-05-23 Marie E. Machacek , Greg L. Bryan , Peter Anninos , Avery Meiksin , Michael L. Norman

Extracting information from cosmic surveys is often done in a two-step process, construction of maps and then summary statistics such as two-point functions. We use simulations to demonstrate the advantages of a general Bayesian framework…

Cosmology and Nongalactic Astrophysics · Physics 2023-12-06 Alan Junzhe Zhou , Scott Dodelson

[abridged] We describe LyMAS (Ly-alpha Mass Association Scheme), a method of predicting clustering statistics in the Ly-alpha forest on large scales from moderate resolution simulations of the dark matter distribution, with calibration from…

Cosmology and Nongalactic Astrophysics · Physics 2014-03-05 Sébastien Peirani , David H. Weinberg , Stéphane Colombi , Jérémy Blaizot , Yohan Dubois , Christophe Pichon

We present an emulator that accurately predicts the power spectrum of galaxies in redshift space as a function of cosmological parameters. Our emulator is based on a 2nd-order Lagrangian bias expansion that is displaced to Eulerian space…

Cosmology and Nongalactic Astrophysics · Physics 2023-03-29 Marcos Pellejero-Ibanez , Raul E. Angulo , Matteo Zennaro , Jens Stuecker , Sergio Contreras , Giovanni Arico , Francisco Maion

Hydrodynamical cosmological simulations are a powerful tool for accurately predicting the properties of the intergalactic medium (IGM) and for producing mock skies that can be compared against observational data. However, the need to…

Cosmology and Nongalactic Astrophysics · Physics 2023-08-08 Cooper Jacobus , Peter Harrington , Zarija Lukić

We investigate the properties of the Lyman alpha forest as predicted by numerical simulations for a range of currently viable cosmological models. This is done in order to understand the dependencies of the forest on cosmological…

Astrophysics · Physics 2009-10-31 M. E. Machacek , G. L. Bryan , A. Meiksin , P. Anninos , D. Thayer , M. L. Norman , Y. Zhang

Applying Bayesian optimization in problems wherein the search space is unknown is challenging. To address this problem, we propose a systematic volume expansion strategy for the Bayesian optimization. We devise a strategy to guarantee that…

Machine Learning · Statistics 2019-10-30 Huong Ha , Santu Rana , Sunil Gupta , Thanh Nguyen , Hung Tran-The , Svetha Venkatesh

Bayesian optimization works effectively optimizing parameters in black-box problems. However, this method did not work for high-dimensional parameters in limited trials. Parameters can be efficiently explored by nonlinearly embedding them…

Machine Learning · Computer Science 2022-06-14 Shoki Miyagawa , Atsuyoshi Yano , Naoko Sawada , Isamu Ogawa

In this paper, we present a novel approach to accelerate the Bayesian inference process, focusing specifically on the nested sampling algorithms. Bayesian inference plays a crucial role in cosmological parameter estimation, providing a…

Instrumentation and Methods for Astrophysics · Physics 2024-10-17 Isidro Gómez-Vargas , J. Alberto Vázquez

Autonomous methods to align beamlines can decrease the amount of time spent on diagnostics, and also uncover better global optima leading to better beam quality. The alignment of these beamlines is a high-dimensional, expensive-to-sample…

We aim to construct a machine-learning approach that allows for a pixel-by-pixel reconstruction of the intergalactic medium (IGM) density field for various warm dark matter (WDM) models using the Lyman-alpha forest. With this regression…

We describe cosmological simulation techniques and their application to studies of cosmic structure formation, with particular attention to recent hydrodynamic simulations of structure in the high redshift universe. Collisionless N-body…

Astrophysics · Physics 2008-02-03 David H. Weinberg , Neal Katz , Lars Hernquist

An understanding of how input parameter uncertainty in the numerical simulation of physical models leads to simulation output uncertainty is a challenging task. Common methods for quantifying output uncertainty, such as performing a grid or…

Materials Science · Physics 2023-09-25 Samuel G. McCallum , James E. Lerpiniére , Kjeld O. Jensen , Alison B. Walker

Galaxy clusters are one of the most powerful probes to study extensions of General Relativity and the Standard Cosmological Model. Upcoming surveys like the Vera Rubin Observatory's Legacy Survey of Space and Time are expected to…

Cosmology and Nongalactic Astrophysics · Physics 2024-06-19 Markus Michael Rau , Florian Kéruzoré , Nesar Ramachandra , Lindsey Bleem

In this work we extend our recently developed multi-fidelity emulation technique to the simulated Lyman-$\alpha$ forest flux power spectrum. Multi-fidelity emulation allows interpolation of simulation outputs between cosmological parameters…

Cosmology and Nongalactic Astrophysics · Physics 2022-10-25 M. A. Fernandez , Ming-Feng Ho , Simeon Bird

Modern sky surveys are returning precision measurements of cosmological statistics such as weak lensing shear correlations, the distribution of galaxies, and cluster abundance. To fully exploit these observations, theorists must provide…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-15 Katrin Heitmann , Earl Lawrence , Juliana Kwan , Salman Habib , David Higdon