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In neural circuits, statistical connectivity rules strongly depend on neuronal type. Here we study dynamics of neural networks with cell-type specific connectivity by extending the dynamic mean field method, and find that these networks…

Neurons and Cognition · Quantitative Biology 2015-02-24 Johnatan Aljadeff , Merav Stern , Tatyana O. Sharpee

We perform a numerical study on the application of electromagnetic flux on a heterogeneous network of Chialvo neurons represented by a ring-star topology. Heterogeneities are realized by introducing additive noise modulations on both the…

Dynamical Systems · Mathematics 2024-02-09 Indranil Ghosh , Sishu Shankar Muni , Hammed Olawale Fatoyinbo

Networks of living neurons exhibit an avalanche mode of activity, experimentally found in organotypic cultures. Moreover, experimental studies of morphology indicate that neurons develop a network of small-world-like connections, with the…

Neurons and Cognition · Quantitative Biology 2007-05-23 G. L. Pellegrini , L. de Arcangelis , H. J. Herrmann , C. Perrone-Capano

Recurrent Neural Network models have elucidated the interplay between structure and dynamics in biological neural networks, particularly the emergence of irregular and rhythmic activities in cortex. However, most studies have focused on…

Neurons and Cognition · Quantitative Biology 2025-09-04 Nimrod Sherf , Xaq Pitkow , Krešimir Josić , Kevin E. Bassler

The human brain is a complex network of interconnected brain regions organized into functional modules with distinct roles in cognition and behavior. An important question concerns the persistence and stability of these modules over the…

Neurons and Cognition · Quantitative Biology 2015-10-28 Richard F. Betzel , Bratislav Mišić , Ye He , Jeffrey Rumschlag , Xi-Nian Zuo , Olaf Sporns

Modularity is an important topological attribute for functional brain networks. Recent studies have reported that modularity of functional networks varies not only across individuals being related to demographics and cognitive performance,…

Neurons and Cognition · Quantitative Biology 2018-10-05 Makoto Fukushima , Richard F. Betzel , Ye He , Marcel A. de Reus , Martijn P. van den Heuvel , Xi-Nian Zuo , Olaf Sporns

Single trial analyses of ensemble activity in alert animals demonstrate that cortical circuits dynamics evolve through temporal sequences of metastable states. Metastability has been studied for its potential role in sensory coding, memory…

Neurons and Cognition · Quantitative Biology 2016-03-23 Luca Mazzucato , Alfredo Fontanini , Giancarlo La Camera

One of the paramount challenges in neuroscience is to understand the dynamics of individual neurons and how they give rise to network dynamics when interconnected. Historically, researchers have resorted to graph theory, statistics, and…

Neurons and Cognition · Quantitative Biology 2019-02-08 Jean-Baptiste Bardin , Gard Spreemann , Kathryn Hess

The network representation is becoming increasingly popular for the description of cardiovascular interactions based on the analysis of multiple simultaneously collected variables. However, the traditional methods to assess network links…

As a person learns a new skill, distinct synapses, brain regions, and circuits are engaged and change over time. In this paper, we develop methods to examine patterns of correlated activity across a large set of brain regions. Our goal is…

Neurons and Cognition · Quantitative Biology 2013-10-31 Danielle S. Bassett , Nicholas F. Wymbs , M. Puck Rombach , Mason A. Porter , Peter J. Mucha , Scott T. Grafton

Imaging neuroscience links brain activation maps to behavior and cognition via correlational studies. Due to the nature of the individual experiments, based on eliciting neural response from a small number of stimuli, this link is…

Machine Learning · Statistics 2013-11-21 Yannick Schwartz , Bertrand Thirion , Gaël Varoquaux

The proposed analysis of the currently available experimental results concerning the neural cell activity in the brain area known as hippocampus suggests a particular mechanism of spatial information and memory processing. Below it is…

Other Quantitative Biology · Quantitative Biology 2007-05-23 Yu. Dabaghian , A. G. Cohn , L. Frank

In present paper we discuss several approaches to reconstructing the topology of the physical space from neural activity data of CA1 fields in mice hippocampus, in particular, having Cognitome theory of brain function in mind. In our…

Neurons and Cognition · Quantitative Biology 2022-12-07 Konstantin Sorokin , Anton Ayzenberg , Konstantin Anokhin , Vladimir Sotskov , Maxim Beketov , Andrey Zaitsew , Robert Drynkin

We develop a phenomenological coarse--graining procedure for activity in a large network of neurons, and apply this to recordings from a population of 1000+ cells in the hippocampus. Distributions of coarse--grained variables seem to…

Neurons and Cognition · Quantitative Biology 2019-10-30 Leenoy Meshulam , Jeffrey L. Gauthier , Carlos D. Brody , David W. Tank , William Bialek

We study synchronization of non-diffusively coupled map networks with arbitrary network topologies, where the connections between different units are, in general, not symmetric and can carry both positive and negative weights. We show that,…

Chaotic Dynamics · Physics 2010-02-09 Frank Bauer , Fatihcan M. Atay , Juergen Jost

The proper functioning of the nervous system depends critically on the intricate network of synaptic connections that are generated during the system development. During the network formation, the growth cones migrate through the embryonic…

Disordered Systems and Neural Networks · Physics 2007-05-23 Ronen Segev , Eshel Ben-Jacob

Neuronal networks in dissociated culture combined with cell engineering technology offer a pivotal platform to constructively explore the relationship between structure and function in living neuronal networks. Here, we fabricated defined…

Neurons and Cognition · Quantitative Biology 2023-01-11 Yuya Sato , Hideaki Yamamoto , Hideyuki Kato , Takashi Tanii , Shigeo Sato , Ayumi Hirano-Iwata

Characterizing time-evolving networks is a challenging task, but it is crucial for understanding the dynamic behavior of complex systems such as the brain. For instance, how spatial networks of functional connectivity in the brain evolve…

Applications · Statistics 2021-01-27 Marie Roald , Suchita Bhinge , Chunying Jia , Vince Calhoun , Tülay Adalı , Evrim Acar

Understanding conformational change is crucial for programming and controlling the function of many mechanical systems such as allosteric enzymes and tunable metamaterials. Of particular interest is the relationship between the network…

Computational Physics · Physics 2019-07-24 Jason Z. Kim , Zhixin Lu , Steven H. Strogatz , Danielle S. Bassett

Future communication networks are expected to feature autonomic (or self-organizing) mechanisms to ease deployment (self-configuration), tune parameters automatically (self-optimization) and repair the network (self-healing).…

Networking and Internet Architecture · Computer Science 2012-09-07 Richard Combes , Zwi Altman , Eitan Altman
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