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We introduce a model of adaptive temporal networks whose evolution is regulated by an interplay between node activity and dynamic exchange of information through links. We study the model by using a master equation approach. Starting from a…

Physics and Society · Physics 2016-04-18 Takaaki Aoki , Luis E. C. Rocha , Thilo Gross

Online communities are important organizational forms where members socialize and share information. Curiously, different online communities often overlap considerably in topic and membership. Recent research has investigated competition…

Social and Information Networks · Computer Science 2025-04-16 Nathan TeBlunthuis

We study how the community structure of bipartite mutualistic networks changes in a dynamic context. First, we consider a real mutualistic network and introduce extinction events according to several scenarios. We model extinctions as node…

Physics and Society · Physics 2019-06-04 Somaye Sheykhali , Juan Fernández-Gracia , Anna Traveset , Víctor M. Eguíluz

Ecological networks exhibit non-random structural patterns, such as modularity and nestedness, which indicate ecosystem stability, species diversity, and connectance. Such structure-stability relationships are well known. However, another…

Populations and Evolution · Quantitative Biology 2014-06-12 Kazuhiro Takemoto , Saori Kanamaru , Wenfeng Feng

A mutualism is an interaction where the involved species benefit from each other. We study a two-dimensional hexagonal three-state cellular automaton model of a two-species mutualistic system. The simple model is characterized by four…

Cellular Automata and Lattice Gases · Physics 2010-11-23 Andrew Adamatzky , Martin Grube

Recent studies suggest that the emergence of cooperative behavior can be explained by generalized reciprocity, a behavioral mechanism based on the principle of "help anyone if helped by someone". In complex systems, the cooperative dynamics…

Physics and Society · Physics 2020-11-02 Viktor Stojkoski

Transformations to create more sustainable social-ecological systems are urgently needed. Structural change is a feature of transformations of social-ecological systems that is of critical importance but is little understood. Here, we…

Adaptation and Self-Organizing Systems · Physics 2017-04-21 Steven J. Lade , Örjan Bodin , Jonathan F. Donges , Elin Enfors Kautsky , Diego Galafassi , Per Olsson , Maja Schlüter

Several networks occurring in real life have modular structures that are arranged in an hierarchical fashion. In this paper, we have proposed a model for such networks, using a stochastic generation method. Using this model we show that,…

Physics and Society · Physics 2009-03-12 Raj Kumar Pan , Sitabhra Sinha

The far-reaching consequences of ecological interactions in the dynamics of biological communities remain an intriguing subject. For decades, competition has been a cornerstone in ecological processes, but mounting evidence shows that…

Populations and Evolution · Quantitative Biology 2021-07-19 F. Meloni , G. Nakamura , B. Grammaticos , A. S. Martinez , M. Badoual

Networks are widely used to model the interaction between individual dynamical systems. In many instances, the total number of units as well as the interaction coupling are not fixed in time, but rather constantly evolve. In terms of…

Adaptation and Self-Organizing Systems · Physics 2023-09-19 Melvyn Tyloo

We develop a spatially realistic model of mutualistic metacommunities that exploits the joint structure of spatial and interaction networks. This model exhibits a sharp transition between a stable non-null equilibrium state and a global…

Populations and Evolution · Quantitative Biology 2022-06-23 Marc Ohlmann , François Munoz , François Massol , Wilfried Thuiller

Many networks are complex dynamical systems, where both attributes of nodes and topology of the network (link structure) can change with time. We propose a model of co-evolving networks where both node at- tributes and network structure…

Social and Information Networks · Computer Science 2011-06-15 Yoon-Sik Cho , Greg Ver Steeg , Aram Galstyan

In both natural and artificial studies, evolution is often seen as synonymous to natural selection. Individuals evolve under pressures set by environments that are either reset or do not carry over significant changes from previous…

Populations and Evolution · Quantitative Biology 2023-05-17 Eleni Nisioti , Clément Moulin-Frier

We study the evolution of a random weighted network with complex nonlinear dynamics at each node, whose activity may cease as a result of interactions with other nodes. Starting from a knowledge of the micro-level behaviour at each node, we…

Statistical Mechanics · Physics 2007-05-23 Sitabhra Sinha , Sudeshna Sinha

The relationship between network topology and system dynamics has significant implications for unifying our understanding of the interplay among metabolic, gene-regulatory, and ecosystem network architecures. Here we analyze the stability…

Populations and Evolution · Quantitative Biology 2015-06-17 Cameron Smith , Raymond S. Puzio , Aviv Bergman

We investigate the relationship between the nested organization of mutualistic systems and their robustness against the extinction of species. We establish that a nested pattern of contacts is the best possible one as far as robustness is…

Populations and Evolution · Quantitative Biology 2007-09-20 E. Burgos , H. Ceva , R. Perazzo , M. Devoto , D. Medan , M. Zimmermann , A. M. Delbue

We propose a model of emergence of cooperation in evolutionary games that high- lights the role of network formation and effect of network structure. In line with empirical data, the model proposes a mechanism that explains the persistence…

Adaptation and Self-Organizing Systems · Physics 2008-12-14 David Chavalarias

We investigate the selective forces that promote the emergence of modularity in nature. We demonstrate the spontaneous emergence of modularity in a population of individuals that evolve in a changing environment. We show that the level of…

Molecular Networks · Quantitative Biology 2009-11-13 Jiankui He , Jun Sun , Michael W. Deem

Many complex systems change their structure over time, in these cases dynamic networks can provide a richer representation of such phenomena. As a consequence, many inference methods have been generalized to the dynamic case with the aim to…

Social and Information Networks · Computer Science 2023-10-25 Hadiseh Safdari , Martina Contisciani , Caterina De Bacco

Understanding the architectural subtleties of ecological networks, believed to confer them enhanced stability and robustness, is a subject of outmost relevance. Mutualistic interactions have been profusely studied and their corresponding…

Populations and Evolution · Quantitative Biology 2015-02-19 Virginia Domínguez-García , Miguel A. Muñoz