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Low-dimensional embeddings (LDEs) of high-dimensional data are ubiquitous in science and engineering. They allow us to quickly understand the main properties of the data, identify outliers and processing errors, and inform the next steps of…

Machine Learning · Computer Science 2024-06-17 Jonas Fischer , Rong Ma

Motivated by applications in high-dimensional data analysis where strong signals often stand out easily and weak ones may be indistinguishable from the noise, we develop a statistical framework to provide a novel categorization of the data…

Methodology · Statistics 2013-05-02 X. Jessie Jeng

The dynamic mode decomposition (DMD) is a broadly applicable dimensionality reduction algorithm that approximates a matrix containing time-series data by the outer product of a matrix of exponentials, representing Fourier-like time…

Optimization and Control · Mathematics 2017-12-07 Travis Askham , Peng Zheng , Aleksandr Aravkin , J. Nathan Kutz

Smoothing and filtering two-dimensional sequences are fundamental tasks in fields such as computer vision. Conventional filtering algorithms often rely on the selection of the filtering window, limiting their applicability in certain…

Information Theory · Computer Science 2025-07-22 Xufeng Chen , Liang Yan , Xiaoshan Gao

We have designed a new efficient dimensionality reduction algorithm in order to investigate new ways of accurately characterizing the biodiversity, namely from a geometric point of view, scaling with large environmental sets produced by NGS…

In this paper, we analyze the nontrivial zeros of the Riemann zeta-function using the multidimensional scaling (MDS) algorithm and computational visualization features. The nontrivial zeros of the Riemann zeta-function as well as the…

Number Theory · Mathematics 2021-04-16 José Tenreiro Machado , Yuri Luchko

Analyzing large volumes of high-dimensional data is an issue of fundamental importance in data science, molecular simulations and beyond. Several approaches work on the assumption that the important content of a dataset belongs to a…

Machine Learning · Statistics 2018-03-20 Elena Facco , Maria d'Errico , Alex Rodriguez , Alessandro Laio

Datasets such as images, text, or movies are embedded in high-dimensional spaces. However, in important cases such as images of objects, the statistical structure in the data constrains samples to a manifold of dramatically lower…

Machine Learning · Computer Science 2019-10-29 Stefano Recanatesi , Matthew Farrell , Madhu Advani , Timothy Moore , Guillaume Lajoie , Eric Shea-Brown

Low-dimensional embeddings are essential for machine learning tasks involving graphs, such as node classification, link prediction, community detection, network visualization, and network compression. Although recent studies have identified…

Machine Learning · Computer Science 2025-03-04 Nikolaos Nakis , Niels Raunkjær Holm , Andreas Lyhne Fiehn , Morten Mørup

Differential Dynamic Microscopy (DDM) is the combination of optical microscopy to statistical analysis to obtain information about the dynamical behaviour of a variety of samples spanning from soft matter physics to biology. In DDM, the…

Computer Vision and Pattern Recognition · Computer Science 2020-12-11 M. Norouzisadeh , G. Cerchiari , F. Croccolo

The discovering of low-dimensional manifolds in high-dimensional data is one of the main goals in manifold learning. We propose a new approach to identify the effective dimension (intrinsic dimension) of low-dimensional manifolds. The scale…

Statistics Theory · Mathematics 2008-03-17 Xiaohui Wang , J. S. Marron

Randomized dimensionality reduction is a widely-used algorithmic technique for speeding up large-scale Euclidean optimization problems. In this paper, we study dimension reduction for a variety of maximization problems, including…

Data Structures and Algorithms · Computer Science 2025-06-03 Jie Gao , Rajesh Jayaram , Benedikt Kolbe , Shay Sapir , Chris Schwiegelshohn , Sandeep Silwal , Erik Waingarten

We propose a novel method that exploits fMRI Repetition Suppression (RS-fMRI) to measure the dimensionality of the set response vectors, i.e. the dimension of the space of linear combinations of neural population activity patterns in…

Quantitative Methods · Quantitative Biology 2016-06-07 Mattia Rigotti , Stefano Fusi

Embedding nodes of a large network into a metric (e.g., Euclidean) space has become an area of active research in statistical machine learning, which has found applications in natural and social sciences. Generally, a representation of a…

Machine Learning · Statistics 2021-08-16 Owen G. Ward , Zhen Huang , Andrew Davison , Tian Zheng

We introduce a novel and scalable Bayesian framework for multivariate-density-density regression (DDR), designed to model relationships between multivariate distributions. Our approach addresses the critical issue of distributions residing…

Methodology · Statistics 2025-09-24 Khai Nguyen , Yang Ni , Peter Mueller

Clustering is an important tool for data exploration where the goal is to subdivide a data set into disjoint clusters that fit well into the underlying data structure. When dealing with sensitive data, privacy-preserving algorithms aim to…

Cryptography and Security · Computer Science 2024-08-21 Johannes Liebenow , Yara Schütt , Tanya Braun , Marcel Gehrke , Florian Thaeter , Esfandiar Mohammadi

Clustering is one of the most widely used procedures in the analysis of microarray data, for example with the goal of discovering cancer subtypes based on observed heterogeneity of genetic marks between different tissues. It is well-known…

Methodology · Statistics 2009-04-21 Heng Lian

The problem of detecting and quantifying the presence of symmetries in datasets is useful for model selection, generative modeling, and data analysis, amongst others. While existing methods for hard-coding transformations in neural networks…

Machine Learning · Computer Science 2023-07-06 Alex Gabel , Victoria Klein , Riccardo Valperga , Jeroen S. W. Lamb , Kevin Webster , Rick Quax , Efstratios Gavves

Symmetry is one of the most central concepts in physics, and it is no surprise that it has also been widely adopted as an inductive bias for machine-learning models applied to the physical sciences. This is especially true for models…

Chemical Physics · Physics 2024-12-23 Marcel F. Langer , Sergey N. Pozdnyakov , Michele Ceriotti

Low-dimensional embeddings for data from disparate sources play critical roles in multi-modal machine learning, multimedia information retrieval, and bioinformatics. In this paper, we propose a supervised dimensionality reduction method…

Machine Learning · Computer Science 2021-01-15 Yanjun Li , Bihan Wen , Hao Cheng , Yoram Bresler