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The present paper studies existence and distributional uniqueness of subclasses of stationary hard-core particle systems arising as thinnings of stationary particle processes. These subclasses are defined by natural maximality criteria. We…

Probability · Mathematics 2018-01-17 Christian Hirsch , Günter Last

Chemical syntheses that provide nanocrystals (NCs) with narrow distributions in size and shape are critical for NC research. This has led to the investigation of magic-sized NCs (MSNCs), a class of semiconductor crystallites that grow in…

Mesoscale and Nanoscale Physics · Physics 2024-07-15 Gabriel Nagamine , Julian Santen , Juri G. Crimmann , Aniket S. Mule , Andrew B. Pun , David J. Norris

The transition from globular to elongated states of biopolymers in shear flow occurs at a distinct critical shear rate, $\dot{\gamma }^{*}$. The magnitude of $\dot{\gamma }^{*}$ depends on the internal potential and the polymer length. For…

Computational Physics · Physics 2018-06-19 Yuanzheng Zhu , Zixiang Liu , Michael T. Griffin , David N. Ku , Cyrus K. Aidun

Single-cell RNA sequencing (scRNA-seq) is powerful technology that allows researchers to understand gene expression patterns at the single-cell level. However, analysing scRNA-seq data is challenging due to issues and biases in data…

Genomics · Quantitative Biology 2023-12-14 Jinlu Liu , Sara Wade , Natalia Bochkina

We study the responses of fluid-immersed soft hydrogel spheres that are sheared under controlled volume fractions. Slippery, deformable particles along with the density-matched interstitial fluid are sandwiched between two opposing rough…

Soft Condensed Matter · Physics 2020-07-22 J. -C. Tsai , M. -R. Chou , P. -C. Huang , H. -T. Fei

Single-particle tracking allows to infer the motion of single molecules in living cells. When we observe a long trajectory (more than 100 points), it is possible that the particle switches mode of motion over time. Then, fitting a single…

Methodology · Statistics 2018-04-16 Vincent Briane , Charles Kervrann , Myriam Vimond

We study the influence of chain stiffness on droplet flow in a nano-channel, coated with semiflexible hydrophobic polymers by means of non-equilibrium molecular-dynamics simulations. The studied system is then a moving droplet in the slit…

Soft Condensed Matter · Physics 2017-10-18 Kevin Speyer , Claudio Pastorino

Large scale molecular dynamics simulations are used to investigate the structural and dynamical modifications of supercooled water when confined inside an hydrophilic nanopore. We then investigate the evolution of the auto-organization of…

Disordered Systems and Neural Networks · Physics 2015-06-25 Victor Teboul

Soft Glassy Materials (SGM) consist in dense amorphous assemblies of colloidal particles of multiple shapes, elasticity, and interactions, which confer upon them solid-like properties at rest. They are ubiquitously encountered in modern…

Single-file transport refers to the motion of particles in a narrow channel, such that they cannot bypass each other. This constraint leads to strong correlations between the particles, described by correlation profiles, which measure the…

Statistical Mechanics · Physics 2024-02-09 Aurélien Grabsch , Théotim Berlioz , Pierre Rizkallah , Pierre Illien , Olivier Bénichou

We apply monomer-resolved computer simulations of supercoiled ring polymers under shear, taking full account of the hydrodynamic interactions, accompanied, in parallel, by simulations in which these are switched off. The combination of…

Soft Condensed Matter · Physics 2024-04-17 Christoph Schneck , Jan Smrek , Christos N. Likos , Andreas Zöttl

Self-consistent field approach is used to model a single end-tethered polymer chain on a substrate subject to various forces in three dimensions. Starting from a continuous Gaussian chain model, the following perturbations are considered:…

We investigate the behavior of colloidal suspensions with different volume fractions confined between parallel walls under a range of steady shears. We model the particles using molecular dynamics (MD) with full hydrodynamic interactions…

Soft Condensed Matter · Physics 2014-09-18 Frances E. Mackay , Kyle Pastor , Mikko Karttunen , Colin Denniston

The field of neuromorphic computing promises extremely low-power and low-latency sensing and processing. Challenges in transferring learning algorithms from traditional artificial neural networks (ANNs) to spiking neural networks (SNNs)…

Computer Vision and Pattern Recognition · Computer Science 2021-10-27 Jesse Hagenaars , Federico Paredes-Vallés , Guido de Croon

We analyze the transport properties of a low density ensemble of identical macroscopic particles immersed in an active fluid. The particles are modeled as inelastic hard spheres (granular gas). The non-homogeneous active fluid is modeled by…

Soft Condensed Matter · Physics 2017-10-17 Francisco Vega Reyes , Antonio Lasanta

A single levitated nanoparticle is used as a nano-reactor for studying surface chemistry at the nanoscale. Optical levitation under controlled pressure, surrounding gas composition, and humidity provides extreme control over the…

Biological nanoparticles (BNPs) are of high interest due to their key role in various biological processes and use as biomarkers. BNP size and molecular composition are decisive for their functions, but simultaneous determination of both…

Biological Physics · Physics 2016-09-26 Stephan Block , Björn Johansson Fast , Anders Lundgren , Vladimir P. Zhdanov , Fredrik Höök

Addition of particles to a viscoelastic suspension dramatically alters the properties of the mixture, particularly when it is sheared or otherwise processed. Shear-induced stretching of the polymers results in elastic stress that causes a…

Soft Condensed Matter · Physics 2023-06-28 Sijie Sun , Nan Xue , Stefano Aime , Hyoungsoo Kim , Jizhou Tang , Gareth H. McKinley , Howard A. Stone , David A. Weitz

Spiking neural networks (SNN) are a biologically inspired model of neural networks with certain brain-like properties. In the past few decades, this model has received increasing attention in computer science community, owing also to the…

Neural and Evolutionary Computing · Computer Science 2024-03-28 Prithwineel Paul , Petr Sosik , Lucie Ciencialova

Thermoresponsive hydrogels have been studied intensively for creating smart drug carriers and controlled drug delivery. Understanding the drug release kinetics and corresponding transport mechanisms of nanoparticles (NPs) in a…

Soft Condensed Matter · Physics 2020-05-12 Yi Wang , Zhen Li , Jie Ouyang , George Em Karniadakis