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All-pairs set similarity is a widely used data mining task, even for large and high-dimensional datasets. Traditionally, similarity search has focused on discovering very similar pairs, for which a variety of efficient algorithms are known.…

Data Structures and Algorithms · Computer Science 2020-03-09 Cyrus Rashtchian , Aneesh Sharma , David P. Woodruff

Let $T$ be a tree space (or tree network) represented by a weighted tree with $t$ vertices, and $S$ be a set of $n$ stochastic points in $T$, each of which has a fixed location with an independent existence probability. We investigate two…

Computational Geometry · Computer Science 2016-12-16 Jie Xue , Yuan Li

Similarity search is critical for many database applications, including the increasingly popular online services for Content-Based Multimedia Retrieval (CBMR). These services, which include image search engines, must handle an overwhelming…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-10-16 Thiago S. F. X. Teixeira , George Teodoro , Eduardo Valle , Joel H. Saltz

An important question that arises in the study of high dimensional vector representations learned from data is: given a set $\mathcal{D}$ of vectors and a query $q$, estimate the number of points within a specified distance threshold of…

Data Structures and Algorithms · Computer Science 2018-09-21 Xian Wu , Moses Charikar , Vishnu Natchu

Adaptive Random Testing (ART) enhances the testing effectiveness (including fault-detection capability) of Random Testing (RT) by increasing the diversity of the random test cases throughout the input domain. Many ART algorithms have been…

Software Engineering · Computer Science 2024-03-20 Rubing Huang , Chenhui Cui , Junlong Lian , Dave Towey , Weifeng Sun , Haibo Chen

Mining large-scale high-throughput tandem mass spectrometry data sets is a very important problem in mass spectrometry based protein identification. One of the fundamental problems in large scale mining of spectra is to design appropriate…

Quantitative Methods · Quantitative Biology 2007-05-23 Debojyoti Dutta , Ting Chen

With the rapid development of GPU (Graphics Processing Unit) technologies and neural networks, we can explore more appropriate data structures and algorithms. Recent progress shows that neural networks can partly replace traditional data…

Information Retrieval · Computer Science 2023-10-17 Renyang Liu , Jun Zhao , Xing Chu , Yu Liang , Wei Zhou , Jing He

Biased sampling and missing data complicates statistical problems ranging from causal inference to reinforcement learning. We often correct for biased sampling of summary statistics with matching methods and importance weighting. In this…

Statistics Theory · Mathematics 2022-06-02 James Sharpnack

Bidirectional Long Short-Term Memory (LSTM) is a special kind of Recurrent Neural Network (RNN) architecture which is designed to model sequences and their long-range dependencies more precisely than RNNs. This paper proposes to use deep…

Machine Learning · Computer Science 2020-04-07 Neda Tavakoli

Motivated by applications in computer vision and databases, we introduce and study the Simultaneous Nearest Neighbor Search (SNN) problem. Given a set of data points, the goal of SNN is to design a data structure that, given a collection of…

Data Structures and Algorithms · Computer Science 2016-04-11 Piotr Indyk , Robert Kleinberg , Sepideh Mahabadi , Yang Yuan

The ability of fast similarity search at large scale is of great importance to many Information Retrieval (IR) applications. A promising way to accelerate similarity search is semantic hashing which designs compact binary codes for a large…

Information Retrieval · Computer Science 2010-04-30 Dell Zhang , Jun Wang , Deng Cai , Jinsong Lu

Edit distance similarity search, also called approximate pattern matching, is a fundamental problem with widespread database applications. The goal of the problem is to preprocess $n$ strings of length $d$, to quickly answer queries $q$ of…

Data Structures and Algorithms · Computer Science 2020-07-10 Samuel McCauley

Hashing has been widely researched to solve the large-scale approximate nearest neighbor search problem owing to its time and storage superiority. In recent years, a number of online hashing methods have emerged, which can update the hash…

Databases · Computer Science 2022-12-07 Wenzhe Jia , Yuan Cao , Junwei Liu , Jie Gui

This paper reconsiders common benchmarking approaches to nearest neighbor search. It is shown that the concept of local intrinsic dimensionality (LID) allows to choose query sets of a wide range of difficulty for real-world datasets.…

Information Retrieval · Computer Science 2019-07-18 Martin Aumüller , Matteo Ceccarello

Locality sensitive hashing (LSH) is one of the widely-used approaches to approximate nearest neighbor search (ANNS) in high-dimensional spaces. The first work on LSH for the Euclidean distance, E2LSH, showed how ANNS can be solved…

We study the problem of approximating Hamming distance in sublinear time under property-preserving hashing (PPH), where only hashed representations of inputs are available. Building on the threshold evaluation framework of Fleischhacker,…

Computational Complexity · Computer Science 2025-03-25 Dongfang Zhao

We present a new algorithm for the $c$--approximate nearest neighbor search without false negatives for $l_2^d$. We enhance the dimension reduction method presented in \cite{wygos_red} and combine it with the standard results of Indyk and…

Computational Geometry · Computer Science 2017-10-02 Piotr Wygocki

In this paper, we consider the problems from the area of sublinear-time algorithms of edge sampling, edge counting, and triangle counting. Part of our contribution is that we consider three different settings, differing in the way in which…

Data Structures and Algorithms · Computer Science 2022-04-13 Jakub Tětek , Mikkel Thorup

In this paper, we report progress on answering the open problem presented by Pagh~[14], who considered the nearest neighbor search without false negatives for the Hamming distance. We show new data structures for solving the $c$-approximate…

Computational Geometry · Computer Science 2017-09-14 Piotr Sankowski , Piotr Wygocki

We present a GPU-based Locality Sensitive Hashing (LSH) algorithm to speed up beam search for sequence models. We utilize the winner-take-all (WTA) hash, which is based on relative ranking order of hidden dimensions and thus resilient to…

Computation and Language · Computer Science 2018-06-05 Xing Shi , Shizhen Xu , Kevin Knight