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Section identification is an important task for library science, especially knowledge management. Identifying the sections of a paper would help filter noise in entity and relation extraction. In this research, we studied the paper section…

Computation and Language · Computer Science 2024-12-17 Sijia Zhou , Xin Li

Medical terminology normalization aims to map the clinical mention to terminologies come from a knowledge base, which plays an important role in analyzing Electronic Health Record(EHR) and many downstream tasks. In this paper, we focus on…

Computation and Language · Computer Science 2021-01-25 Ming Liang , Kui Xue , Tong Ruan

Large Language Models (LLMs) provide a possibility to make a great breakthrough in medicine. The establishment of a standardized medical benchmark becomes a fundamental cornerstone to measure progression. However, medical environments in…

Computation and Language · Computer Science 2024-04-05 Xidong Wang , Guiming Hardy Chen , Dingjie Song , Zhiyi Zhang , Zhihong Chen , Qingying Xiao , Feng Jiang , Jianquan Li , Xiang Wan , Benyou Wang , Haizhou Li

Despite the rapid development of natural language processing (NLP) implementation in electronic medical records (EMRs), Chinese EMRs processing remains challenging due to the limited corpus and specific grammatical characteristics,…

Computation and Language · Computer Science 2020-10-14 Honglei Liu , Yan Xu , Zhiqiang Zhang , Ni Wang , Yanqun Huang , Yanjun Hu , Zhenghan Yang , Rui Jiang , Hui Chen

Clinical Named Entity Recognition (CNER) aims to identify and classify clinical terms such as diseases, symptoms, treatments, exams, and body parts in electronic health records, which is a fundamental and crucial task for clinical and…

Computation and Language · Computer Science 2018-04-16 Qi Wang , Yuhang Xia , Yangming Zhou , Tong Ruan , Daqi Gao , Ping He

Medical information extraction consists of a group of natural language processing (NLP) tasks, which collaboratively convert clinical text to pre-defined structured formats. Current state-of-the-art (SOTA) NLP models are highly integrated…

Computation and Language · Computer Science 2022-03-09 Enwei Zhu , Qilin Sheng , Huanwan Yang , Jinpeng Li

Biomedical language understanding benchmarks are the driving forces for artificial intelligence applications with large language model (LLM) back-ends. However, most current benchmarks: (a) are limited to English which makes it challenging…

Computation and Language · Computer Science 2023-10-24 Wei Zhu , Xiaoling Wang , Huanran Zheng , Mosha Chen , Buzhou Tang

Machine learning-based multi-label medical text classifications can be used to enhance the understanding of the human body and aid the need for patient care. We present a broad study on clinical natural language processing techniques to…

Information Retrieval · Computer Science 2020-04-02 Vithya Yogarajan , Jacob Montiel , Tony Smith , Bernhard Pfahringer

The emergence of various medical large language models (LLMs) in the medical domain has highlighted the need for unified evaluation standards, as manual evaluation of LLMs proves to be time-consuming and labor-intensive. To address this…

Computation and Language · Computer Science 2023-12-21 Yan Cai , Linlin Wang , Ye Wang , Gerard de Melo , Ya Zhang , Yanfeng Wang , Liang He

Ontology can be used for the interpretation of natural language. To construct an anti-infective drug ontology, one needs to design and deploy a methodological step to carry out the entity discovery and linking. Medical synonym resources…

Computation and Language · Computer Science 2018-12-06 Ying Shen , Yang Deng , Kaiqi Yuan , Li Liu , Yong Liu

The terminology used in Biomedicine shows lexical peculiarities that have required the elaboration of terminological resources and information retrieval systems with specific functionalities. The main characteristics are the high rates of…

Computation and Language · Computer Science 2012-04-02 Mónica Marrero , Sonia Sánchez-Cuadrado , Julián Urbano , Jorge Morato , José-Antonio Moreiro

The Precision Medicine Initiative states that treatments for a patient should take into account not only the patient's disease, but his/her specific genetic variation as well. The vast biomedical literature holds the potential for…

Information Retrieval · Computer Science 2019-04-22 Jiaming Qu , Yue Wang

A speech emotion recognition algorithm based on multi-feature and Multi-lingual fusion is proposed in order to resolve low recognition accuracy caused by lack of large speech dataset and low robustness of acoustic features in the…

Computation and Language · Computer Science 2020-01-17 Chunyi Wang

Chinese Spell Checking (CSC) aims to detect and correct erroneous characters for user-generated text in the Chinese language. Most of the Chinese spelling errors are misused semantically, phonetically or graphically similar characters.…

Computation and Language · Computer Science 2021-05-27 Heng-Da Xu , Zhongli Li , Qingyu Zhou , Chao Li , Zizhen Wang , Yunbo Cao , Heyan Huang , Xian-Ling Mao

With a widespread use of digital imaging data in hospitals, the size of medical image repositories is increasing rapidly. This causes difficulty in managing and querying these large databases leading to the need of content based medical…

Computer Vision and Pattern Recognition · Computer Science 2017-08-02 Adnan Qayyum , Syed Muhammad Anwar , Muhammad Awais , Muhammad Majid

Current Computer-Aided Diagnosis (CAD) methods mainly depend on medical images. The clinical information, which usually needs to be considered in practical clinical diagnosis, has not been fully employed in CAD. In this paper, we propose a…

Image and Video Processing · Electrical Eng. & Systems 2021-03-11 Songxiao Yang , Xiabi Liu , Zhongshu Zheng , Wei Wang , Xiaohong Ma

Synonym extraction is an important task in natural language processing and often used as a submodule in query expansion, question answering and other applications. Automatic synonym extractor is highly preferred for large scale…

Computation and Language · Computer Science 2015-06-02 Liangliang Cao , Chang Wang

Event extraction is an important work of medical text processing. According to the complex characteristics of medical text annotation, we use the end-to-end event extraction model to enhance the output formatting information of events.…

Computation and Language · Computer Science 2022-08-22 Wei Feng , Ruochen Huang , Yun Yu , Huiting Sun , Yun Liu

Ensuring the general efficacy and goodness for human beings from medical large language models (LLM) before real-world deployment is crucial. However, a widely accepted and accessible evaluation process for medical LLM, especially in the…

Objective: We investigate whether deep learning techniques for natural language processing (NLP) can be used efficiently for patient phenotyping. Patient phenotyping is a classification task for determining whether a patient has a medical…

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