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We present a recursive way to partition hypergraphs which creates and exploits hypergraph geometry and is suitable for many-core parallel architectures. Such partitionings are then used to bring sparse matrices in a recursive Bordered Block…

Data Structures and Algorithms · Computer Science 2011-05-24 B. O. Fagginger Auer , R. H. Bisseling

Sparse tensor computing is a core computational part of numerous applications in areas such as data science, graph processing, and scientific computing. Sparse tensors offer the potential of skipping unnecessary computations caused by zero…

Hardware Architecture · Computer Science 2023-03-28 Midia Reshadi , David Gregg

We propose different implementations of the sparse matrix--dense vector multiplication (\spmv{}) for finite fields and rings $\Zb/m\Zb$. We take advantage of graphic card processors (GPU) and multi-core architectures. Our aim is to improve…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-09-09 Brice Boyer , Jean-Guillaume Dumas , Pascal Giorgi

We present an MPI-parallel algorithm for the in-situ visualization of computational data that is built around a distributed linear forest-of-octrees data structure. Such octrees are frequently used in element-based numerical simulations;…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-09-06 Carsten Burstedde

Several methods for density matrix propagation in distributed computing environments, such as clusters and graphics processing units, are proposed and evaluated. It is demonstrated that the large communication overhead associated with each…

Chemical Physics · Physics 2014-07-16 Luke J. Edwards , Ilya Kuprov

We present a matrix-factorization algorithm that scales to input matrices with both huge number of rows and columns. Learned factors may be sparse or dense and/or non-negative, which makes our algorithm suitable for dictionary learning,…

Machine Learning · Statistics 2017-11-15 Arthur Mensch , Julien Mairal , Bertrand Thirion , Gael Varoquaux

The matrices used in many computational settings are naturally sparse, holding a small percentage of nonzero elements. Storing such matrices in specialized sparse formats enables algorithms that avoid wasting computation on zeros,…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-13 Pratyush Das , Amirhossein Basareh , Adhitha Dias , Artem Pelenitsyn , Kirshanthan Sundararajah , Milind Kulkarni , Ben Delaware

We propose a method that meta-learns a knowledge on matrix factorization from various matrices, and uses the knowledge for factorizing unseen matrices. The proposed method uses a neural network that takes a matrix as input, and generates…

Machine Learning · Statistics 2021-06-30 Tomoharu Iwata

A parallel algorithm has perfect strong scaling if its running time on P processors is linear in 1/P, including all communication costs. Distributed-memory parallel algorithms for matrix multiplication with perfect strong scaling have only…

Data Structures and Algorithms · Computer Science 2012-02-16 Grey Ballard , James Demmel , Olga Holtz , Benjamin Lipshitz , Oded Schwartz

The increasing importance of multicore processors calls for a reevaluation of established numerical algorithms in view of their ability to profit from this new hardware concept. In order to optimize the existent algorithms, a detailed…

Performance · Computer Science 2012-03-01 Gerald Schubert , Georg Hager , Holger Fehske

We consider the problem of secure distributed matrix multiplication in which a user wishes to compute the product of two matrices with the assistance of honest but curious servers. We show how to construct polynomial schemes for the outer…

Information Theory · Computer Science 2024-05-13 Ryann Cartor , Rafael G. L. D'Oliveira , Salim El Rouayheb , Daniel Heinlein , David Karpuk , Alex Sprintson

Reducing the memory footprint of neural networks is a crucial prerequisite for deploying them in small and low-cost embedded devices. Network parameters can often be reduced significantly through pruning. We discuss how to best represent…

Data Structures and Algorithms · Computer Science 2021-11-25 Elias Trommer , Bernd Waschneck , Akash Kumar

We propose a framework for training neural networks that are coupled with partial differential equations (PDEs) in a parallel computing environment. Unlike most distributed computing frameworks for deep neural networks, our focus is to…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-25 Kailai Xu , Weiqiang Zhu , Eric Darve

A novel parallel algorithm for matrix multiplication is presented. The hyper-systolic algorithm makes use of a one-dimensional processor abstraction. The procedure can be implemented on all types of parallel systems. It can handle…

Mathematical Software · Computer Science 2007-05-23 Thomas Lippert , Nikolay Petkov , Paolo Palazzari , Klaus Schilling

Traditional parallel schedulers running on cluster supercomputers support only static scheduling, where the number of processors allocated to an application remains fixed throughout the execution of the job. This results in…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-06-15 Rajesh Sudarsan , Calvin J. Ribbens

We present an efficient numerical method for computing Hamiltonian matrix elements between non-orthogonal Slater determinants, focusing on the most time-consuming component of the calculation that involves a sparse array. In the usual case…

Nuclear Theory · Physics 2012-10-22 Yutaka Utsuno , Noritaka Shimizu , Takaharu Otsuka , Takashi Abe

Projecting a vector onto a simplex is a well-studied problem that arises in a wide range of optimization problems. Numerous algorithms have been proposed for determining the projection; however, the primary focus of the literature has been…

Optimization and Control · Mathematics 2023-10-11 Yongzheng Dai , Chen Chen

We develop and implement in this paper a fast sparse assembly algorithm, the fundamental operation which creates a compressed matrix from raw index data. Since it is often a quite demanding and sometimes critical operation, it is of…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-28 Stefan Engblom , Dimitar Lukarski

Multilevel/multigrid methods is one of the most popular approaches for solving a large sparse linear system of equations, typically, arising from the discretization of partial differential equations. One critical step in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-23 Fande Kong

The sparse matrix-vector multiplication (SpMxV) is a kernel operation widely used in iterative linear solvers. The same sparse matrix is multiplied by a dense vector repeatedly in these solvers. Matrices with irregular sparsity patterns…

Numerical Analysis · Computer Science 2012-02-28 Kadir Akbudak , Enver Kayaaslan , Cevdet Aykanat