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Graph-based representations underlie a wide range of scientific problems. Graph connectivity is typically represented as a sparse matrix in the Compressed Sparse Row format. Large-scale graphs rely on distributed storage, allocating…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-14 Bruno Magalhaes , Felix Schürmann

We evaluate optimized parallel sparse matrix-vector operations for two representative application areas on widespread multicore-based cluster configurations. First the single-socket baseline performance is analyzed and modeled with respect…

Performance · Computer Science 2012-03-01 Gerald Schubert , Georg Hager , Holger Fehske , Gerhard Wellein

We consider the problem of sparse matrix multiplication by the column row method in a distributed setting where the matrix product is not necessarily sparse. We present a surprisingly simple method for "consistent" parallel processing of…

Data Structures and Algorithms · Computer Science 2012-11-20 Andrea Campagna , Konstantin Kutzkov , Rasmus Pagh

Generalized sparse matrix-matrix multiplication is a key primitive for many high performance graph algorithms as well as some linear solvers such as multigrid. We present the first parallel algorithms that achieve increasing speedups for an…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-08-09 Aydın Buluç , John R. Gilbert

We evaluate optimized parallel sparse matrix-vector operations for several representative application areas on widespread multicore-based cluster configurations. First the single-socket baseline performance is analyzed and modeled with…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-03-01 Gerald Schubert , Holger Fehske , Georg Hager , Gerhard Wellein

We consider the problem of developing an efficient multi-threaded implementation of the matrix-vector multiplication algorithm for sparse matrices with structural symmetry. Matrices are stored using the compressed sparse row-column format…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-05-18 Vicente H. F. Batista , George O. Ainsworth , Fernando L. B. Ribeiro

We propose a novel approach to iterated sparse matrix dense matrix multiplication, a fundamental computational kernel in scientific computing and graph neural network training. In cases where matrix sizes exceed the memory of a single…

The sparse matrix-vector (SpMV) multiplication is an important computational kernel, but it is notoriously difficult to execute efficiently. This paper investigates algorithm performance for unstructured sparse matrices, which are more…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-27 Kobe Bergmans , Karl Meerbergen , Raf Vandebril

Matrix-matrix multiplication is a basic operation in linear algebra and an essential building block for a wide range of algorithms in various scientific fields. Theory and implementation for the dense, square matrix case are well-developed.…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-01 Alfio Lazzaro , Joost VandeVondele , Juerg Hutter , Ole Schuett

We design and develop a work-efficient multithreaded algorithm for sparse matrix-sparse vector multiplication (SpMSpV) where the matrix, the input vector, and the output vector are all sparse. SpMSpV is an important primitive in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-26 Ariful Azad , Aydin Buluc

Accelerators for sparse matrix multiplication are important components in emerging systems. In this paper, we study the main challenges of accelerating Sparse Matrix Multiplication (SpMM). For the situations that data is not stored in the…

Hardware Architecture · Computer Science 2019-06-04 Pareesa Ameneh Golnari , Sharad Malik

Sparse matrix multiplication is an important component of linear algebra computations. Implementing sparse matrix multiplication on an associative processor (AP) enables high level of parallelism, where a row of one matrix is multiplied in…

Mathematical Software · Computer Science 2017-05-23 L. Yavits , A. Morad , R. Ginosar

Linear-scaling electronic-structure techniques, also called O(N) techniques, rely heavily on the multiplication of sparse matrices, where the sparsity arises from spatial cut-offs. In order to treat very large systems, the calculations must…

Materials Science · Physics 2009-10-31 D. R. Bowler , T. Miyazaki , M. J. Gillan

We consider the problem of designing a coding scheme that allows both sparsity and privacy for distributed matrix-vector multiplication. Perfect information-theoretic privacy requires encoding the input sparse matrices into matrices…

Information Theory · Computer Science 2022-03-04 Marvin Xhemrishi , Rawad Bitar , Antonia Wachter-Zeh

We introduce a data distribution scheme for $\mathcal{H}$-matrices and a distributed-memory algorithm for $\mathcal{H}$-matrix-vector multiplication. Our data distribution scheme avoids an expensive $\Omega(P^2)$ scheduling procedure used…

Numerical Analysis · Mathematics 2020-09-23 Yingzhou Li , Jack Poulson , Lexing Ying

As nowadays Machine Learning (ML) techniques are generating huge data collections, the problem of how to efficiently engineer their storage and operations is becoming of paramount importance. In this article we propose a new lossless…

Data Structures and Algorithms · Computer Science 2022-03-31 Paolo Ferragina , Travis Gagie , Dominik Köppl , Giovanni Manzini , Gonzalo Navarro , Manuel Striani , Francesco Tosoni

We present the submatrix method, a highly parallelizable method for the approximate calculation of inverse p-th roots of large sparse symmetric matrices which are required in different scientific applications. We follow the idea of…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-03-06 Michael Lass , Stephan Mohr , Hendrik Wiebeler , Thomas D. Kühne , Christian Plessl

We present an algorithm to reduce the computational effort for the multiplication of a given matrix with an unknown column vector. The algorithm decomposes the given matrix into a product of matrices whose entries are either zero or integer…

Information Theory · Computer Science 2020-02-28 Ralf R. Müller , Bernhard Gäde , Ali Bereyhi

Generalized sparse matrix-matrix multiplication (or SpGEMM) is a key primitive for many high performance graph algorithms as well as for some linear solvers, such as algebraic multigrid. Here we show that SpGEMM also yields efficient…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-03-19 Aydin Buluc , John Gilbert

We present a parallel hierarchical solver for general sparse linear systems on distributed-memory machines. For large-scale problems, this fully algebraic algorithm is faster and more memory-efficient than sparse direct solvers because it…

Numerical Analysis · Mathematics 2017-12-21 Chao Chen , Hadi Pouransari , Sivasankaran Rajamanickam , Erik G. Boman , Eric Darve
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