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Segmentation in 3D scans is playing an increasingly important role in current clinical practice supporting diagnosis, tissue quantification, or treatment planning. The current 3D approaches based on convolutional neural networks usually…

Computer Vision and Pattern Recognition · Computer Science 2019-03-12 Alexey Novikov , David Major , Maria Wimmer , Dimitrios Lenis , Katja Bühler

Accurate segmentation of polyps in colonoscopy images is essential for early-stage diagnosis and management of colorectal cancer. Despite advancements in deep learning for polyp segmentation, enduring limitations persist. The edges of…

Computer Vision and Pattern Recognition · Computer Science 2024-05-28 Mengqi Lei , Xin Wang

Volumetric segmentation of lesions on CT scans is important for many types of analysis, including lesion growth kinetic modeling in clinical trials and machine learning of radiomic features. Manual segmentation is laborious, and impractical…

Computer Vision and Pattern Recognition · Computer Science 2018-11-13 Bo Zhou , Randolph Crawford , Belma Dogdas , Gregory Goldmacher , Antong Chen

Usually, lesions are not isolated but are associated with the surrounding tissues. For example, the growth of a tumour can depend on or infiltrate into the surrounding tissues. Due to the pathological nature of the lesions, it is…

Image and Video Processing · Electrical Eng. & Systems 2022-10-12 Lin Wang , Xiufen Ye , Donghao Zhang , Wanji He , Lie Ju , Yi Luo , Huan Luo , Xin Wang , Wei Feng , Kaimin Song , Xin Zhao , Zongyuan Ge

Downsampling images and labels, often necessitated by limited resources or to expedite network training, leads to the loss of small objects and thin boundaries. This undermines the segmentation network's capacity to interpret images…

Image and Video Processing · Electrical Eng. & Systems 2024-10-27 Shahzad Ali , Yu Rim Lee , Soo Young Park , Won Young Tak , Soon Ki Jung

Vascular structure segmentation plays a crucial role in medical analysis and clinical applications. The practical adoption of fully supervised segmentation models is impeded by the intricacy and time-consuming nature of annotating vessels…

Computer Vision and Pattern Recognition · Computer Science 2024-02-20 Zhanqiang Guo , Zimeng Tan , Jianjiang Feng , Jie Zhou

In this work, we present a novel 3D-Convolutional Neural Network (CNN) architecture called I2I-3D that predicts boundary location in volumetric data. Our fine-to-fine, deeply supervised framework addresses three critical issues to 3D…

Computer Vision and Pattern Recognition · Computer Science 2016-05-27 Jameson Merkow , David Kriegman , Alison Marsden , Zhuowen Tu

3D segmentation with deep learning if trained with full resolution is the ideal way of achieving the best accuracy. Unlike in 2D, 3D segmentation generally does not have sparse outliers, prevents leakage to surrounding soft tissues, at the…

Image and Video Processing · Electrical Eng. & Systems 2020-06-11 Orhan Akal , Zhigang Peng , Gerardo Hermosillo Valadez

Segmentation is a critical step in medical image analysis. Fully Convolutional Networks (FCNs) have emerged as powerful segmentation models achieving state-of-the-art results in various medical image datasets. Network architectures are…

Image and Video Processing · Electrical Eng. & Systems 2019-07-29 Maria G. Baldeon Calisto , Susana K. Lai-Yuen

In this paper, a novel model of 3D elastic mesh is presented for image segmentation. The model is inspired by stress and strain in physical elastic objects, while the repulsive force and elastic force in the model are defined slightly…

Computer Vision and Pattern Recognition · Computer Science 2016-10-11 Xiaodong Zhuang , N. E. Mastorakis , Jieru Chi , Hanping Wang

Many deep learning based automated medical image segmentation systems, in reality, face difficulties in deployment due to the cost of massive data annotation and high latency in model iteration. We propose a dynamic interactive learning…

Computer Vision and Pattern Recognition · Computer Science 2023-12-12 Mu Tian , Xiaohui Chen , Yi Gao

Deep convolutional neural networks are powerful tools for learning visual representations from images. However, designing efficient deep architectures to analyse volumetric medical images remains challenging. This work investigates…

Computer Vision and Pattern Recognition · Computer Science 2017-07-10 Wenqi Li , Guotai Wang , Lucas Fidon , Sebastien Ourselin , M. Jorge Cardoso , Tom Vercauteren

Prostate specific membrane antigen (PSMA) positron emission tomography/computed tomography (PET/CT) imaging provides a tremendously exciting frontier in visualization of prostate cancer (PCa) metastatic lesions. However, accurate…

Medical Physics · Physics 2024-12-05 Amirhosein Toosi , Sara Harsini , François Bénard , Carlos Uribe , Arman Rahmim

Efforts to automate the reconstruction of neural circuits from 3D electron microscopic (EM) brain images are critical for the field of connectomics. An important computation for reconstruction is the detection of neuronal boundaries. Images…

Computer Vision and Pattern Recognition · Computer Science 2015-08-21 Kisuk Lee , Aleksandar Zlateski , Ashwin Vishwanathan , H. Sebastian Seung

Breast tumor segmentation is a critical task in computer-aided diagnosis (CAD) systems for breast cancer detection because accurate tumor size, shape and location are important for further tumor quantification and classification. However,…

Image and Video Processing · Electrical Eng. & Systems 2020-09-29 Bryar Shareef , Alex Vakanski , Min Xian , Phoebe E. Freer

We propose a method to non-rigidly align a three-dimensional (3D) volumetric image with a two-dimensional (2D) planar image representing a projection of the deformed volume. The application in mind comes from biological studies in which 2D…

Optimization and Control · Mathematics 2021-01-12 Paul Striewski , Benedikt Wirth

Automated blood vessel segmentation is vital for biomedical imaging, as vessel changes indicate many pathologies. Still, precise segmentation is difficult due to the complexity of vascular structures, anatomical variations across patients,…

Volumetric segmentation is important in medical imaging, but current methods face challenges like requiring lots of manual annotations and being tailored to specific tasks, which limits their versatility. General segmentation models used…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Zifan Chen , Xinyu Nan , Jiazheng Li , Jie Zhao , Haifeng Li , Ziling Lin , Haoshen Li , Heyun Chen , Yiting Liu , Lei Tang , Li Zhang , Bin Dong

We present an endpoint box regression module(epBRM), which is designed for predicting precise 3D bounding boxes using raw LiDAR 3D point clouds. The proposed epBRM is built with sequence of small networks and is computationally lightweight.…

Computer Vision and Pattern Recognition · Computer Science 2020-12-25 Kiwoo Shin , Masayoshi Tomizuka

The performance of supervised deep learning methods for medical image segmentation is often limited by the scarcity of labeled data. As a promising research direction, semi-supervised learning addresses this dilemma by leveraging unlabeled…

Image and Video Processing · Electrical Eng. & Systems 2024-05-13 Zihang Liu , Chunhui Zhao