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Semantic segmentation is crucial for medical image analysis, enabling precise disease diagnosis and treatment planning. However, many advanced models employ complex architectures, limiting their use in resource-constrained clinical…

Image and Video Processing · Electrical Eng. & Systems 2026-01-06 Le-Anh Tran , Chung Nguyen Tran , Nhan Cach Dang , Anh Le Van Quoc , Jordi Carrabina , David Castells-Rufas , Minh Son Nguyen

Accurate nuclei segmentation in microscopy whole slide images (WSIs) remains challenging due to variability in staining, imaging conditions, and tissue morphology. We propose CellGenNet, a knowledge distillation framework for robust…

Computer Vision and Pattern Recognition · Computer Science 2025-11-20 Srijan Ray , Bikesh K. Nirala , Jason T. Yustein , Sundaresh Ram

Medical image segmentation plays a crucial role in clinical diagnosis and treatment planning. Although models based on convolutional neural networks (CNNs) and Transformers have achieved remarkable success in medical image segmentation…

Image and Video Processing · Electrical Eng. & Systems 2024-10-04 Jiashu Xu

Graph Neural Networks (GNNs) have shown promising results in various tasks, among which link prediction is an important one. GNN models usually follow a node-centric message passing procedure that aggregates the neighborhood information to…

Machine Learning · Computer Science 2022-01-17 Baole Ai , Zhou Qin , Wenting Shen , Yong Li

While significant attention has been recently focused on designing supervised deep semantic segmentation algorithms for vision tasks, there are many domains in which sufficient supervised pixel-level labels are difficult to obtain. In this…

Computer Vision and Pattern Recognition · Computer Science 2017-11-27 Xide Xia , Brian Kulis

Semantic segmentation for medical 3D image stacks enables accurate volumetric reconstructions, computer-aided diagnostics and follow up treatment planning. In this work, we present a novel variant of the Unet model called the NUMSnet that…

Image and Video Processing · Electrical Eng. & Systems 2023-04-07 Sohini Roychowdhury

Pathology image segmentation is crucial in computational pathology for analyzing histological features relevant to cancer diagnosis and prognosis. However, current methods face major challenges in clinical applications due to limited…

Computer Vision and Pattern Recognition · Computer Science 2025-08-20 Zhixuan Chen , Junlin Hou , Liqi Lin , Yihui Wang , Yequan Bie , Xi Wang , Yanning Zhou , Ronald Cheong Kin Chan , Hao Chen

Fully-automatic execution is the ultimate goal for many Computer Vision applications. However, this objective is not always realistic in tasks associated with high failure costs, such as medical applications. For these tasks, semi-automatic…

Computer Vision and Pattern Recognition · Computer Science 2020-07-20 Jing Yu Koh , Duc Thanh Nguyen , Quang-Trung Truong , Sai-Kit Yeung , Alexander Binder

In the medical images field, semantic segmentation is one of the most important, yet difficult and time-consuming tasks to be performed by physicians. Thanks to the recent advancement in the Deep Learning models regarding Computer Vision,…

Image and Video Processing · Electrical Eng. & Systems 2023-09-21 Leonardo Crespi , Paolo Roncaglioni , Damiano Dei , Ciro Franzese , Nicola Lambri , Daniele Loiacono , Pietro Mancosu , Marta Scorsetti

Semantic segmentation has a broad range of applications in a variety of domains including land coverage analysis, autonomous driving, and medical image analysis. Convolutional neural networks (CNN) and Vision Transformers (ViTs) provide the…

Computer Vision and Pattern Recognition · Computer Science 2023-05-08 Hans Thisanke , Chamli Deshan , Kavindu Chamith , Sachith Seneviratne , Rajith Vidanaarachchi , Damayanthi Herath

Medical image segmentation is crucial for many healthcare tasks, including disease diagnosis and treatment planning. One key area is the segmentation of skin lesions, which is vital for diagnosing skin cancer and monitoring patients. In…

Computer Vision and Pattern Recognition · Computer Science 2025-07-22 Salah Eddine Bekhouche , Gaby Maroun , Fadi Dornaika , Abdenour Hadid

Cell segmentation and tracking in microscopy images are of great significance to new discoveries in biology and medicine. In this study, we propose a novel approach to combine cell segmentation and cell tracking into a unified end-to-end…

Computer Vision and Pattern Recognition · Computer Science 2021-02-23 Yuqian Chen , Yang Song , Chaoyi Zhang , Fan Zhang , Lauren O'Donnell , Wojciech Chrzanowski , Weidong Cai

With the advent of high-throughput sequencing (HTS) in molecular biology and medicine, the need for scalable statistical solutions for modeling complex biological systems has become of critical importance. The increasing number of platforms…

Molecular Networks · Quantitative Biology 2022-10-19 Fernando Palluzzi , Mario Grassi

In recent years, neural networks and especially deep architectures have received substantial attention for EEG signal analysis in the field of brain-computer interfaces (BCIs). In this ongoing research area, the end-to-end models are more…

Machine Learning · Computer Science 2022-04-15 Abbas Salami , Javier Andreu-Perez , Helge Gillmeister

We show dense voxel embeddings learned via deep metric learning can be employed to produce a highly accurate segmentation of neurons from 3D electron microscopy images. A "metric graph" on a set of edges between voxels is constructed from…

Computer Vision and Pattern Recognition · Computer Science 2021-08-09 Kisuk Lee , Ran Lu , Kyle Luther , H. Sebastian Seung

This research presents an enhanced approach for precise segmentation of brain tumor masses in magnetic resonance imaging (MRI) using an advanced 3D-UNet model combined with a Context Transformer (CoT). By architectural expansion CoT, the…

Computer Vision and Pattern Recognition · Computer Science 2024-07-12 Thien-Qua T. Nguyen , Hieu-Nghia Nguyen , Thanh-Hieu Bui , Thien B. Nguyen-Tat , Vuong M. Ngo

Tree-like structures, such as blood vessels, often express complexity at very fine scales, requiring high-resolution grids to adequately describe their shape. Such sparse morphology can alternately be represented by locations of centreline…

Computer Vision and Pattern Recognition · Computer Science 2018-11-09 Kerry Halupka , Rahil Garnavi , Stephen Moore

Although deep CNNs have brought significant improvement to image saliency detection, most CNN based models are sensitive to distortion such as compression and noise. In this paper, we propose an end-to-end generic salient object…

Computer Vision and Pattern Recognition · Computer Science 2020-01-23 Delu Zeng , Yixuan He , Li Liu , Zhihong Chen , Jiabin Huang , Jie Chen , John Paisley

Existing works of reasoning segmentation often fall short in complex cases, particularly when addressing complicated queries and out-of-domain images. Inspired by the chain-of-thought reasoning, where harder problems require longer thinking…

Computer Vision and Pattern Recognition · Computer Science 2026-01-27 Shiu-hong Kao , Chak Ho Huang , Huaiqian Liu , Yu-Wing Tai , Chi-Keung Tang

Recent advancements in image segmentation have focused on enhancing the efficiency of the models to meet the demands of real-time applications, especially on edge devices. However, existing research has primarily concentrated on single-task…

Computer Vision and Pattern Recognition · Computer Science 2024-04-16 Gabriele Rosi , Claudia Cuttano , Niccolò Cavagnero , Giuseppe Averta , Fabio Cermelli