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Neural dynamics underlie behaviors from memory to sleep, yet identifying mechanisms for higher-order phenomena (e.g., social interaction) is experimentally challenging. Existing whole-brain models often fail to scale to single-neuron…

Neurons and Cognition · Quantitative Biology 2025-11-03 Sam Fatehmanesh Vegas , Matt Thomson , James Gornet , David Prober

Quantifying fish community structure is essential for understanding biodiversity and ecosystem responses in a changing environment, yet existing survey methods provide limited high-frequency, quantitative observations. Conventional…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Kota Ishikawa , Takuma Masui , Keita Koeda , Rickdane Gomez , Lucas Yutaka Kimura , Michio Kondoh

In nature, flocking or swarm behavior is observed in many species as it has beneficial properties like reducing the probability of being caught by a predator. In this paper, we propose SELFish (Swarm Emergent Learning Fish), an approach…

Multiagent Systems · Computer Science 2019-05-13 Carsten Hahn , Thomy Phan , Thomas Gabor , Lenz Belzner , Claudia Linnhoff-Popien

The adaptive learning capabilities seen in biological neural networks are largely a product of the self-modifying behavior emerging from online plastic changes in synaptic connectivity. Current methods in Reinforcement Learning (RL) only…

Neural and Evolutionary Computing · Computer Science 2020-06-16 Samuel Schmidgall

Effective conservation actions require effective population monitoring. However, accurately counting animals in the wild to inform conservation decision-making is difficult. Monitoring populations through image sampling has made data…

Computer Vision and Pattern Recognition · Computer Science 2022-10-12 Penny Tarling , Mauricio Cantor , Albert Clapés , Sergio Escalera

In the past decade, we have witnessed the rise of deep learning to dominate the field of artificial intelligence. Advances in artificial neural networks alongside corresponding advances in hardware accelerators with large memory capacity,…

Neural and Evolutionary Computing · Computer Science 2022-03-11 David Ha , Yujin Tang

Interest in multimodal function optimization is expanding rapidly since real world optimization problems often demand locating multiple optima within a search space. This article presents a new multimodal optimization algorithm named as the…

Neural and Evolutionary Computing · Computer Science 2014-07-01 Erik Cuevas , Mauricio Gonzalez

Trajectories from a pair of interacting zebrafish are used to test for the existence of anticipatory dynamics in natural systems. Anticipatory dynamics (AD) is unusual in that causal events are not necessarily ordered by their temporal…

Biological Physics · Physics 2022-01-03 Chun-Jen Chen , Chi-An Lin , Heng Hsu , José Jiun-Shian Wu , Yu-Ting Huang , C. K. Chan

Combining the predictions of collections of neural networks often outperforms the best single network. Such ensembles are typically trained independently, and their superior `wisdom of the crowd' originates from the differences between…

Machine Learning · Computer Science 2020-06-23 Benjamin Brazowski , Elad Schneidman

In this paper we investigate the usage of machine learning for interpreting measured sensor values in sensor modules. In particular we analyze the potential of artificial neural networks (ANNs) on low-cost micro-controllers with a few…

Machine Learning · Computer Science 2020-12-16 Marcus Venzke , Daniel Klisch , Philipp Kubik , Asad Ali , Jesper Dell Missier , Volker Turau

Living in groups brings benefits to many animals, such as a protection against predators and an improved capacity for sensing and making decisions while searching for resources in uncertain environments. A body of studies has shown how…

Populations and Evolution · Quantitative Biology 2019-01-23 Andrea Falcón-Cortés , Denis Boyer , Gabriel Ramos-Fernández

Artificial fish swarm algorithm (AFSA) is one of the swarm intelligence optimization algorithms that works based on population and stochastic search. In order to achieve acceptable result, there are many parameters needs to be adjusted in…

Artificial Intelligence · Computer Science 2014-06-04 Reza Azizi

Data-driven benchmarks have led to significant progress in key scientific modeling domains including weather and structural biology. Here, we introduce the Zebrafish Activity Prediction Benchmark (ZAPBench) to measure progress on the…

Collective sensing is an emergent phenomenon which enables individuals to estimate a hidden property of the environment through the observation of social interactions. Previous work on collective sensing shows that gregarious individuals…

Populations and Evolution · Quantitative Biology 2018-05-24 Stefano Bennati

A comprehensive understanding of animal behavior ecology depends on scalable approaches to quantify and interpret complex, multidimensional behavioral patterns. Traditional field observations are often limited in scope, time-consuming, and…

Swarming of animal groups enthralls scientists in fields ranging from biology to physics to engineering. Complex swarming patterns often arise from simple interactions between individuals to the benefit of the collective whole. The…

Biological Physics · Physics 2017-09-08 Glenn Palmer , Sho Yaida

The Artificial Fish Swarm Algorithm (AFSA) is inspired by the ecological behaviors of fish schooling in nature, viz., the preying, swarming and following behaviors. Owing to a number of salient properties, which include flexibility, fast…

Neural and Evolutionary Computing · Computer Science 2022-06-22 Farhad Pourpanah , Ran Wang , Chee Peng Lim , Xi-Zhao Wang , Danial Yazdani

Zebrafish embryos are a valuable model for drug discovery due to their optical transparency and genetic similarity to humans. However, current evaluations rely on manual inspection, which is costly and labor-intensive. While machine…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Sarath Sivaprasad , Hui-Po Wang , Anna-Lisa Jäckel , Jonas Baumann , Carole Baumann , Jennifer Herrmann , Mario Fritz

In this paper, we examine the use of data from multiple sensing modes, i.e., accelerometry and global navigation satellite system (GNSS), for classifying animal behavior. We extract three new features from the GNSS data, namely, distance…

Machine Learning · Computer Science 2022-10-27 Reza Arablouei , Ziwei Wang , Greg J. Bishop-Hurley , Jiajun Liu

Robots navigating in human crowds need to optimize their paths not only for their task performance but also for their compliance to social norms. One of the key challenges in this context is the lack of standard metrics for evaluating and…

Robotics · Computer Science 2020-07-14 Chieh-En Tsai , Jean Oh