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Stochastic chemical systems with diffusion are modeled with a reaction-diffusion master equation. On a macroscopic level, the governing equation is a reaction-diffusion equation for the averages of the chemical species. On a mesoscopic…

Numerical Analysis · Mathematics 2009-03-06 Stefan Engblom , Lars Ferm , Andreas Hellander , Per Lötstedt

We propose a stochastic model of a fragmentation process, developed by taking into account fragment lifetime as a function of their size based on the Gibrat process. If lifetime is determined by a power function of fragment size, numerical…

Statistical Mechanics · Physics 2015-06-22 Shin-ichi Ito , Satoshi Yukawa

We study clustering in a stochastic system of particles sliding down a fluctuating surface in one and two dimensions. In steady state, the density-density correlation function is a scaling function of separation and system size.This scaling…

Statistical Mechanics · Physics 2009-11-13 Mustansir Barma

Characteristic functions (CFs) provide a very efficient method for evaluating the probability density functions of stochastic thermodynamic quantities and investigating their statistical features in quantum master equations (QMEs). A…

Statistical Mechanics · Physics 2016-12-28 Fei Liu , Jingyi Xi

We consider the class of exchangeable fragmentation-coagulation (EFC) processes where coagulations are multiple and not simultaneous, as in a $\Lambda$-coalescent, and fragmentation dislocates at finite rate an individual block into…

Probability · Mathematics 2021-04-30 Clément Foucart

We propose a dynamical scheme for the combined processes of fragmentation and merging as a model system for cluster dynamics in nature and society displaying scale invariant properties. The clusters merge and fragment with rates…

Statistical Mechanics · Physics 2009-11-11 Jesper Ferkinghoff-Borg , Mogens H. Jensen , Joachim Mathiesen , Poul Olesen

In this work, we study the long time asymptotics of a coagulation model which describes the evolution of a system of particles characterized by their volume and surface area. The aggregation mechanism takes place in two stages: collision…

Analysis of PDEs · Mathematics 2024-11-19 Iulia Cristian , Juan J. L. Velázquez

When dense granular gases are continuously excited under microgravity conditions, spatial inhomogeneities of the particle number density can emerge. A significant share of particles may collect in strongly overpopulated regions, called…

Soft Condensed Matter · Physics 2025-06-19 Sai Preetham Sata , Ralf Stannarius , Benjamin Noack , Dmitry Puzyrev

Federated Learning (FL) is a setting where multiple parties with distributed data collaborate in training a joint Machine Learning (ML) model while keeping all data local at the parties. Federated clustering is an area of research within FL…

Machine Learning · Computer Science 2022-01-20 Morris Stallmann , Anna Wilbik

We introduce and analyse a class of fragmentation-coalescence processes defined on finite systems of particles organised into clusters. Coalescent events merge multiple clusters simultaneously to form a single larger cluster, while…

Probability · Mathematics 2017-01-31 Andreas E. Kyprianou , Steven W. Pagett , Tim Rogers

Compartmentalised biochemical reactions are a ubiquitous building block of biological systems. The interplay between chemical and compartmental dynamics can drive rich and complex dynamical behaviors that are difficult to analyse…

Molecular Networks · Quantitative Biology 2023-06-16 Tommaso Bianucci , Christoph Zechner

A new model that describes adsorption and clustering of particles on a surface is introduced. A {\it clustering} transition is found which separates between a phase of weakly correlated particle distributions and a phase of strongly…

Statistical Mechanics · Physics 2009-10-31 Ofer Biham , Ofer Malcai , Daniel A. Lidar , David Avnir

The sedimentation process of granular materials exists ubiquitously in nature and many fields which involve the solid-liquid separation. This paper employs the coupled computational fluid dynamics and discrete element method (CFD-DEM) to…

Fluid Dynamics · Physics 2017-11-07 Shan-Lin Xu , Rui Sun , Yuan-Qiang Cai , Hong-Lei Sun

To study the dynamics of chemical processes, we often adopt rate equations to observe the change in chemical concentrations. However, when the number of the molecules is small, the fluctuations cannot be neglected. We often study the…

Chemical Physics · Physics 2007-05-23 Yuichi Togashi , Kunihiko Kaneko

The inclusion of a fragmentation mechanism in population balance equations introduces complex interactions that make the analytical or even computational treatment much more difficult than for the pure aggregation case. This is specially…

Disordered Systems and Neural Networks · Physics 2022-03-14 Arturo Berrones-Santos , Luis Benavides-Vázquez , Elisa Schaeffer , Javier Almaguer

In this paper we study the continuous coagulation and multiple fragmentation equation for the mean-field description of a system of particles taking into account the combined effect of the coagulation and the fragmentation processes in…

Analysis of PDEs · Mathematics 2018-11-16 Prasanta Kumar Barik

The fragmentation of filaments in molecular clouds has attracted a lot of attention as there seems to be a relation between the evolution of filaments and star formation. The study of the fragmentation process has been motivated by simple…

Astrophysics of Galaxies · Physics 2018-03-07 R. -A. Chira , J. Kainulainen , J. C. Ibàñez-Mejía , Th. Henning , M. -M. Mac Low

Understanding associations between paired high-dimensional longitudinal datasets is a fundamental yet challenging problem that arises across scientific domains, including longitudinal multi-omic studies. The difficulty stems from the…

Methodology · Statistics 2026-01-21 Jianbin Tan , Pixu Shi

Cluster growth in a coagulating system of active particles (such as microswimmers in a solvent) is studied by theory and simulation. In contrast to passive systems, the net velocity of a cluster can have various scalings dependent on the…

Soft Condensed Matter · Physics 2014-03-21 P. Cremer , H. Löwen

We develop a coarse grained (CG) approach for efficiently simulating calcium dynamics in the endoplasmic reticulum membrane based on a fine stochastic lattice gas model. By grouping neighboring microscopic sites together into CG cells and…

Chemical Physics · Physics 2015-06-15 Chuansheng Shen , Hanshuang Chen