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Citation graph visualisation is a useful tool for contextual awareness in academic research. Unfortunately, existing solutions can suffer from several drawbacks, such as a poor scaling, shallow network traversal, freemium gating, and slow…

Digital Libraries · Computer Science 2025-12-30 Harry Ballington

Deep learning has been recently applied to a multitude of computer vision and medical image analysis problems. Although recent research efforts have improved the state of the art, most of the methods cannot be easily accessed, compared or…

Computer Vision and Pattern Recognition · Computer Science 2018-04-26 Fausto Milletari , Johann Frei , Seyed-Ahmad Ahmadi

Numerical algebraic geometry is the field of computational mathematics concerning the numerical solution of polynomial systems of equations. Bertini, a popular software package for computational applications of this field, includes…

Algebraic Geometry · Mathematics 2013-10-15 Daniel J. Bates , Elizabeth Gross , Anton Leykin , Jose Israel Rodriguez

Evaluating architectural ideas on realistic workloads is increasingly challenging due to the prohibitive cost of detailed simulation and the lack of portable sampling tools. Existing targeted sampling techniques are often tied to specific…

Hardware Architecture · Computer Science 2026-02-03 Zhantong Qiu , Mahyar Samani , Jason Lowe-Power

Several emerging microscopy imaging methods rely on complex interactions between the incident light and the sample. These include interferometry, spectroscopy, and nonlinear optics. Reconstructing a sample from the measured scattered field…

Optics · Physics 2024-04-12 Ruijiao Sun , Rohith Reddy , David Mayerich

A software tool, computing observed and expected upper limits on Poissonian process rates using a hybrid frequentist-Bayesian CLs method, is presented. This tool can be used for simple counting experiments where only signal, background and…

High Energy Physics - Experiment · Physics 2018-03-26 Emmanuel Busato , David Calvet , Timothée Theveneaux-Pelzer

Current methods for detecting spurious correlations rely on analyzing dataset statistics or error patterns, leaving many harmful shortcuts invisible when counterexamples are absent. We introduce BEE (Bridging Explainability and Embeddings),…

Artificial Intelligence · Computer Science 2026-02-12 Cristian Daniel Păduraru , Antonio Bărbălau , Radu Filipescu , Andrei Liviu Nicolicioiu , Elena Burceanu

We introduce the Contour Analysis Tool (CAT), a Python toolkit aimed at identifying and analyzing structural elements in density maps. CAT employs various contouring techniques, including the lowest-closed contour (LCC), linear and…

Instrumentation and Methods for Astrophysics · Physics 2024-09-11 Mark A. Hutchison , Christine M. Koepferl

NSClean is an algorithm and associated python package for removing faint vertical banding and ``picture frame noise'' from JWST Near Infrared Spectrograph (NIRSpec) images. NSClean uses known dark areas to fit a background model to each…

Instrumentation and Methods for Astrophysics · Physics 2023-06-27 Bernard J. Rauscher

OpenMatch is a Python-based library that serves for Neural Information Retrieval (Neu-IR) research. It provides self-contained neural and traditional IR modules, making it easy to build customized and higher-capacity IR systems. In order to…

Information Retrieval · Computer Science 2021-05-07 Zhenghao Liu , Kaitao Zhang , Chenyan Xiong , Zhiyuan Liu , Maosong Sun

Detecting and segmenting dysfluencies is crucial for effective speech therapy and real-time feedback. However, most methods only classify dysfluencies at the utterance level. We introduce StutterCut, a semi-supervised framework that…

Sound · Computer Science 2025-08-05 Suhita Ghosh , Melanie Jouaiti , Jan-Ole Perschewski , Sebastian Stober

Masked token prediction has emerged as a powerful pre-training objective across language, vision, and speech, offering the potential to unify these diverse modalities through a single pre-training task. However, its application for general…

Although Raman spectroscopy is widely used for the investigation of biomedical samples and has a high potential for use in clinical applications, it is not common in clinical routines. One of the factors that obstruct the integration of…

Data Analysis, Statistics and Probability · Physics 2022-01-20 Darina Storozhuk , Oleg Ryabchykov , Juergen Popp , Thomas Bocklitz

Visual Simultaneous Localization and Mapping (VSLAM) research faces significant challenges due to fragmented toolchains, complex system configurations, and inconsistent evaluation methodologies. To address these issues, we present…

Computer Vision and Pattern Recognition · Computer Science 2025-04-08 Alejandro Fontan , Tobias Fischer , Javier Civera , Michael Milford

We present the Quantum Hamiltonian Analysis Toolkit (QHAT), a newly developed application that provides a user-friendly interface for studying Hamiltonians and performing Hamiltonian simulation on fault-tolerant quantum computers. QHAT…

Surface acoustic wave (SAW) devices are ubiquitously used for signal processing and filtering, as well as mechanical, chemical and biological sensing, and show promise as quantum transducers. However, nowadays most SAWs are excited and…

Bayesian additive regression tree (BART) models have seen increased attention in recent years as a general-purpose nonparametric modeling technique. BART combines the flexibility of modern machine learning techniques with the principled…

Methodology · Statistics 2022-11-01 Antonio R. Linero

Coherent optomechanical interaction between acoustic and optical waves known as stimulated Brillouin scattering (SBS) can enable ultra-high resolution signal processing and narrow linewidth lasers important for next generation wireless…

Near linear scaling fragment based quantum chemical calculations are becoming increasingly popular for treating large systems with high accuracy and is an active field of research. However, it remains difficult to set up these calculations…

Computational Engineering, Finance, and Science · Computer Science 2012-09-20 Casper Steinmann , Mikael W. Ibsen , Anne S. Hansen , Jan H. Jensen

With the advancement of deep learning technology, neural networks have demonstrated their excellent ability to provide accurate predictions in many tasks. However, a lack of consideration for neural network calibration will not gain trust…

Machine Learning · Computer Science 2022-11-30 Lei Hsiung , Yung-Chen Tang , Pin-Yu Chen , Tsung-Yi Ho