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We introduce an open-source toolkit for neural machine translation (NMT) to support research into model architectures, feature representations, and source modalities, while maintaining competitive performance, modularity and reasonable…

Recently, the computational neuroscience community has pushed for more transparent and reproducible methods across the field. In the interest of unifying the domain of auditory neuroscience, naplib-python provides an intuitive and general…

Braidlab is a Matlab package for analyzing data using braids. It was designed to be fast, so it can be used on relatively large problems. It uses the object-oriented features of Matlab to provide a class for braids on punctured disks and a…

PLUMED is an open-source software package that is widely used for analyzing and enhancing molecular dynamics simulations that works in conjunction with most available molecular dynamics softwares. While the computational cost of PLUMED…

We report a comprehensive experimental study of spontaneous Brillouin scattering in a few-mode optical fiber, resolving both forward and backward scattering processes for intra- and inter-modal interactions. Using heterodyne detection,…

Tracking individual cells in live-cell imaging provides fundamental insights, inevitable for studying causes and consequences of phenotypic heterogeneity, responses to changing environmental conditions or stressors. Microbial cell tracking,…

On-chip stimulated Brillouin scattering (SBS) has recently been demonstrated in thin-film lithium niobate (TFLN), an emerging material platform for integrated photonics offering large electro-optic and nonlinear properties. While previous…

We present an open-source Python package, SpinWaveToolkit (SWT), for (semi-)analytical modeling of spin-wave dynamics in thin ferromagnetic films and exchange-coupled magnetic bilayers. SWT combines analytical models based on the…

We present a multimode Hamiltonian formulation for the problem of opto-acoustic interactions in optical waveguides. We establish a Hamiltonian representation of the acoustic field and then introduce a full system with a simple opto-acoustic…

The boundary element method (BEM) provides an efficient numerical framework for solving multiple scattering problems in unbounded homogeneous domains, since it reduces the discretization to the domain boundaries, thereby condensing the…

BabelBrain is an open-source standalone graphic-user-interface application designed for studies of neuromodulation using transcranial focused ultrasound. It calculates the transmitted acoustic field in the brain tissue, taking into account…

We introduce a monolithic Brillouin generator based on a semiconductor micropillar cavity embedding a high frequency nanoacoustic resonator operating in the hundreds of GHz range. The concept of two nested resonators allows an independent…

xBIT is a tool for performing parameter scans in beyond the Standard Model theories. It's written in Python and fully open source. The main purpose of xBIT is to provide an easy to use tool to help phenomenologists with their daily task:…

We describe an open-source toolkit for neural machine translation (NMT). The toolkit prioritizes efficiency, modularity, and extensibility with the goal of supporting NMT research into model architectures, feature representations, and…

The emergence of data-driven computational materials science offers unprecedented opportunities to explore complex material landscapes, complementing experimental research with the discovery of novel compounds. To enable these developments,…

Xsuite is a newly developed modular simulation package combining in a single flexible and modern framework the capabilities of different tools developed at CERN in the past decades, notably Sixtrack, Sixtracklib, COMBI and PyHEADTAIL. The…

Summary Brain Predictability toolbox (BPt) represents a unified framework of machine learning (ML) tools designed to work with both tabulated data (in particular brain, psychiatric, behavioral, and physiological variables) and neuroimaging…

Stimulated Brillouin scattering was recently observed in nanoscale silicon waveguides. Surprisingly, thermally-driven photon-phonon conversion in these structures had not yet been reported. Here, we inject an optical probe in a suspended…

Linting tools automatically identify source code fragments that do not follow a set of predefined standards. Such feedback tools are equally desirable for "linting" agile development processes. However, providing concrete feedback on…

In this paper, we present a nonlinear analysis software toolkit, which can help in biomechanical gait data analysis by implementing various nonlinear statistical analysis algorithms. The toolkit is proposed to tackle the need for an…