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Multi-contrast images are commonly acquired together to maximize complementary diagnostic information, albeit at the expense of longer scan times. A time-efficient strategy to acquire high-quality multi-contrast images is to accelerate…
This paper proposes a multi-shell sampling scheme and corresponding transforms for the accurate reconstruction of the diffusion signal in diffusion MRI by expansion in the spherical polar Fourier (SPF) basis. The sampling scheme uses an…
High resolution Magnetic Resonance (MR) images are desired for accurate diagnostics. In practice, image resolution is restricted by factors like hardware and processing constraints. Recently, deep learning methods have been shown to produce…
Sub-cortical brain structure segmentation in Magnetic Resonance Images (MRI) has attracted the interest of the research community for a long time because morphological changes in these structures are related to different neurodegenerative…
Magnetic resonance image (MRI) in high spatial resolution provides detailed anatomical information and is often necessary for accurate quantitative analysis. However, high spatial resolution typically comes at the expense of longer scan…
Compression of hyperspectral images onboard of spacecrafts is a tradeoff between the limited computational resources and the ever-growing spatial and spectral resolution of the optical instruments. As such, it requires low-complexity…
Magnetic Resonance Imaging (MRI) is widely used in clinical practice, but suffered from prolonged acquisition time. Although deep learning methods have been proposed to accelerate acquisition and demonstrate promising performance, they rely…
In the context of compressed sensing (CS), this paper considers the problem of reconstructing sparse signals with the aid of other given correlated sources as multiple side information. To address this problem, we theoretically study a…
Spectral imaging is a fundamental diagnostic technique with widespread application. Conventional spectral imaging approaches have intrinsic limitations on spatial and spectral resolutions due to the physical components they rely on. To…
This thesis investigates the application of near-infrared hyperspectral imaging (NIR-HSI) for food quality analysis. The investigation is conducted through four studies operating with five research hypotheses. For several analyses, the…
To accelerate MRI, the field of compressed sensing is traditionally concerned with optimizing the image quality after a partial undersampling of the measurable $\textit{k}$-space. In our work, we propose to change the focus from the quality…
Super-resolution is widely used in medical imaging to enhance low-quality data, reducing scan time and improving abnormality detection. Conventional super-resolution approaches typically rely on paired datasets of downsampled and original…
Spectral super-resolution (SSR) refers to the hyperspectral image (HSI) recovery from an RGB counterpart. Due to the one-to-many nature of the SSR problem, a single RGB image can be reprojected to many HSIs. The key to tackle this ill-posed…
The rapid growth of hyperspectral data archives in remote sensing (RS) necessitates effective compression methods for storage and transmission. Recent advances in learning-based hyperspectral image (HSI) compression have significantly…
We propose HAMSI (Hessian Approximated Multiple Subsets Iteration), which is a provably convergent, second order incremental algorithm for solving large-scale partially separable optimization problems. The algorithm is based on a local…
Multimodal learning leverages complementary information derived from different modalities, thereby enhancing performance in medical image segmentation. However, prevailing multimodal learning methods heavily rely on extensive well-annotated…
Photoacoustic microscopy (PAM) is a novel implementation of photoacoustic imaging (PAI) for visualizing the 3D bio-structure, which is realized by raster scanning of the tissue. However, as three involved critical imaging parameters,…
When a measurement falls outside the quantization or measurable range, it becomes saturated and cannot be used in classical reconstruction methods. For example, in C-arm angiography systems, which provide projection radiography,…
Traditional model-based image reconstruction (MBIR) methods combine forward and noise models with simple object priors. Recent application of deep learning methods for image reconstruction provides a successful data-driven approach to…
Two novel reduced dimensionality (RD) experiments -(4,3)D-hNCOcaNH and (4,3)D-hNcoCANH- have been presented here to facilitate the backbone resonance assignment of proteins both in terms of its accuracy and speed. The experiments basically…