Related papers: Recognizing Graph Search Trees
A subgraph $T$ of a digraph $D$ is an {\em out-branching} if $T$ is an oriented spanning tree with only one vertex of in-degree zero (called the {\em root}). The vertices of $T$ of out-degree zero are {\em leaves}. In the {\sc Directed…
A vertex of degree one in a tree is called an end vertex and a vertex of degree at least three is called a branch vertex. For a graph $G$, let $\sigma_2$ be the minimum degree sum of two nonadjacent vertices in $G$. We consider tree…
Graphs and their traversal is becoming significant as it is applicable to various areas of mathematics, science and technology. Various problems in fields as varied as biochemistry (genomics), electrical engineering (communication…
Phylogenetic trees and networks are leaf-labelled graphs that are used to describe evolutionary histories of species. The Tree Containment problem asks whether a given phylogenetic tree is embedded in a given phylogenetic network. Given a…
Temporal graphs are graphs where the topology and/or other properties of the graph change with time. They have been used to model applications with temporal information in various domains. Problems on static graphs become more challenging…
Given a connected graph $G$ and a terminal set $R \subseteq V(G)$, {\em Steiner tree} asks for a tree that includes all of $R$ with at most $r$ edges for some integer $r \geq 0$. It is known from [ND12,Garey et. al \cite{steinernpc}] that…
We consider the problem of change-point detection in multivariate time-series. The multivariate distribution of the observations is supposed to follow a graphical model, whose graph and parameters are affected by abrupt changes throughout…
Deliberative tree search is a cornerstone of modern Large Language Model (LLM) research, driving the pivot from brute-force scaling toward algorithmic efficiency. This single paradigm unifies two critical frontiers: \textbf{Test-Time…
The Hausdorff distance is a relatively new measure of similarity of graphs. The notion of the Hausdorff distance considers a special kind of a common subgraph of the compared graphs and depends on the structural properties outside of the…
A spanning subgraph $F$ of a graph $G$ is called {\em perfect} if $F$ is a forest, the degree $d_F(x)$ of each vertex $x$ in $F$ is odd, and each tree of $F$ is an induced subgraph of $G$. Alex Scott (Graphs \& Combin., 2001) proved that…
We consider the well-studied problem of finding a spanning tree with minimum average distance between vertex pairs (called a MAD tree). This is a classic network design problem which is known to be NP-hard. While approximation algorithms…
This paper presents a simple and efficient approach for finding the bridges and failure points in a densely connected network mapped as a graph. The algorithm presented here is a parallel algorithm which works in a distributed environment.…
The three-in-a-tree algorithm of Chudnovsky and Seymour decides in time $O(n^4)$ whether three given vertices of a graph belong to an induced tree. Here, we study four-in-a-tree for triangle-free graphs. We give a structural answer to the…
Suffix trees are an important data structure at the core of optimal solutions to many fundamental string problems, such as exact pattern matching, longest common substring, matching statistics, and longest repeated substring. Recent lines…
This paper is motivated by the k-nearest neighbors search: given an arbitrary metric space, and its finite subsets (a reference set R and a query set Q), design a fast algorithm to find all k-nearest neighbors in R for every point q in Q.…
In the field of algorithmic analysis, one of the more well-known exercises is the subset sum problem. That is, given a set of integers, determine whether one or more integers in the set can sum to a target value. Aside from the brute-force…
In a previous work, we gave a metric on the class of semibinary tree-sibling time consistent phylogenetic networks that is computable in polynomial time; in particular, the problem of deciding if two networks of this kind are isomorphic is…
Searching in partially ordered structures has been considered in the context of information retrieval and efficient tree-like indexes, as well as in hierarchy based knowledge representation. In this paper we focus on tree-like partial…
In this work, we answer an open problem in the study of phylogenetic networks. Phylogenetic trees are rooted binary trees in which all edges are directed away from the root, whereas phylogenetic networks are rooted acyclic digraphs. For the…
The Breadth First Search (BFS) algorithm is the foundation and building block of many higher graph-based operations such as spanning trees, shortest paths and betweenness centrality. The importance of this algorithm increases each day due…