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An elastic-degenerate (ED) string is a sequence of $n$ sets of strings of total length $N$, which was recently proposed to model a set of similar sequences. The ED string matching (EDSM) problem is to find all occurrences of a pattern of…

Data Structures and Algorithms · Computer Science 2021-05-05 Giulia Bernardini , Paweł Gawrychowski , Nadia Pisanti , Solon P. Pissis , Giovanna Rosone

This study focuses on an alignment-free sequence comparison method: the number of words of length k shared between two sequences, also known as the D_2 statistic. The advantages of the use of this statistic over alignment-based methods are…

Quantitative Methods · Quantitative Biology 2009-09-08 Sylvain Foret , Susan R. Wilson , Conrad J. Burden

A classical measure of string comparison is given by the longest common subsequence (LCS) problem on a pair of strings. We consider its generalisation, called the semi-local LCS problem, which arises naturally in many string-related…

Data Structures and Algorithms · Computer Science 2015-03-13 Alexander Tiskin

Searching for all occurrences of a pattern in a text is a fundamental problem in computer science with applications in many other fields, like natural language processing, information retrieval and computational biology. In the last two…

Information Retrieval · Computer Science 2012-10-01 Simone Faro , M. Oguzhan Külekci

Given a set of patterns called a dictionary and a text, the dictionary matching problem is a task to find all occurrence positions of all patterns in the text. The dictionary matching problem can be solved efficiently by using the…

Data Structures and Algorithms · Computer Science 2019-11-06 Diptarama Hendrian

String matching is the problem of deciding whether a given $n$-bit string contains a given $k$-bit pattern. We study the complexity of this problem in three settings. Communication complexity. For small $k$, we provide near-optimal upper…

Computational Complexity · Computer Science 2019-02-21 Alexander Golovnev , Mika Göös , Daniel Reichman , Igor Shinkar

There have been multiple attempts to resolve various inflection matching problems in information retrieval. Stemming is a common approach to this end. Among many techniques for stemming, statistical stemming has been shown to be effective…

Information Retrieval · Computer Science 2016-06-22 Javid Dadashkarimi , Hossein Nasr Esfahani , Heshaam Faili , Azadeh Shakery

In this short note we present a comprehensive bibliography for the online exact string matching problem. The problem consists in finding all occurrences of a given pattern in a text. It is an extensively studied problem in computer science,…

Data Structures and Algorithms · Computer Science 2016-05-18 Simone Faro

Approximate dictionary matching is a classic string matching problem (checking if a query string occurs in a collection of strings) with applications in, e.g., spellchecking, online catalogs, geolocation, and web searchers. We present a…

Data Structures and Algorithms · Computer Science 2016-02-15 Aleksander Cisłak , Szymon Grabowski

This paper studies the performances of BERT combined with tree structure in short sentence ranking task. In retrieval-based question answering system, we retrieve the most similar question of the query question by ranking all the questions…

Computation and Language · Computer Science 2019-09-09 Tong Guo , Huilin Gao

We introduce and address the problem of ad hoc table retrieval: answering a keyword query with a ranked list of tables. This task is not only interesting on its own account, but is also being used as a core component in many other…

Information Retrieval · Computer Science 2018-03-09 Shuo Zhang , Krisztian Balog

We revisit classic string problems considered in the area of parameterized complexity, and study them through the lens of dynamic data structures. That is, instead of asking for a static algorithm that solves the given instance efficiently,…

Data Structures and Algorithms · Computer Science 2022-05-03 Jędrzej Olkowski , Michał Pilipczuk , Mateusz Rychlicki , Karol Węgrzycki , Anna Zych-Pawlewicz

Finding a basis matrix (dictionary) by which objective signals are represented sparsely is of major relevance in various scientific and technological fields. We consider a problem to learn a dictionary from a set of training signals. We…

Disordered Systems and Neural Networks · Physics 2015-06-04 Ayaka Sakata , Yoshiyuki Kabashima

A weighted string over an alphabet of size $\sigma$ is a string in which a set of letters may occur at each position with respective occurrence probabilities. Weighted strings, also known as position weight matrices or uncertain sequences,…

Data Structures and Algorithms · Computer Science 2015-12-09 Carl Barton , Chang Liu , Solon P. Pissis

In this paper we address the following problem in web document and information retrieval (IR): How can we use long-term context information to gain better IR performance? Unlike common IR methods that use bag of words representation for…

Information Retrieval · Computer Science 2015-03-02 H. Palangi , L. Deng , Y. Shen , J. Gao , X. He , J. Chen , X. Song , R. Ward

Code retrieval is to find the code snippet from a large corpus of source code repositories that highly matches the query of natural language description. Recent work mainly uses natural language processing techniques to process both query…

Artificial Intelligence · Computer Science 2021-06-23 Xiang Ling , Lingfei Wu , Saizhuo Wang , Gaoning Pan , Tengfei Ma , Fangli Xu , Alex X. Liu , Chunming Wu , Shouling Ji

This study aims to publish a novel similarity metric to increase the speed of comparison operations. Also the new metric is suitable for distance-based operations among strings. Most of the simple calculation methods, such as string length…

Data Structures and Algorithms · Computer Science 2014-01-28 Sadi Evren Seker , Oguz Altun , Uğur Ayan , Cihan Mert

Beam search is a go-to strategy for decoding neural sequence models. The algorithm can naturally be viewed as a subset optimization problem, albeit one where the corresponding set function does not reflect interactions between candidates.…

Computation and Language · Computer Science 2023-06-26 Clara Meister , Martina Forster , Ryan Cotterell

Approximate string matching is the problem of finding all factors of a text t of length n that are at a distance at most k from a pattern x of length m. Approximate circular string matching is the problem of finding all factors of t that…

Data Structures and Algorithms · Computer Science 2016-04-26 Carl Barton , Costas S. Iliopoulos , Solon P. Pissis

A string matching -- and more generally, sequence matching -- algorithm is presented that has a linear worst-case computing time bound, a low worst-case bound on the number of comparisons (2n), and sublinear average-case behavior that is…

Data Structures and Algorithms · Computer Science 2008-10-02 David R. Musser , Gor V. Nishanov