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We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

The increasing availability of graph-structured data motivates the task of optimising over functions defined on the node set of graphs. Traditional graph search algorithms can be applied in this case, but they may be sample-inefficient and…

Machine Learning · Computer Science 2023-10-31 Xingchen Wan , Pierre Osselin , Henry Kenlay , Binxin Ru , Michael A. Osborne , Xiaowen Dong

Graphical Markov models use graphs, either undirected, directed, or mixed, to represent possible dependences among statistical variables. Applications of undirected graphs (UDGs) include models for spatial dependence and image analysis,…

Artificial Intelligence · Computer Science 2013-02-18 Steen A. Andersson , David Madigan , Michael D. Perlman

Bayesian networks are now being used in enormous fields, for example, diagnosis of a system, data mining, clustering and so on. In spite of their wide range of applications, the statistical properties have not yet been clarified, because…

Machine Learning · Computer Science 2012-12-12 Keisuke Yamazaki , Sumio Watanbe

In this study, we present a multi-class graphical Bayesian predictive classifier that incorporates the uncertainty in the model selection into the standard Bayesian formalism. For each class, the dependence structure underlying the observed…

Machine Learning · Statistics 2018-06-08 Tatjana Pavlenko , Felix Leopoldo Rios

Cartesian products of graphs have been studied extensively since the 1960s. They make it possible to decrease the algorithmic complexity of problems by using the factorization of the product. Hypergraphs were introduced as a generalization…

Discrete Mathematics · Computer Science 2009-09-29 Alain Bretto , Yannick Silvestre , Thierry Vallée

Bayesian causal discovery offers the power to quantify epistemic uncertainties among a broad range of structurally diverse causal theories potentially explaining the data, represented in forms of directed acyclic graphs (DAGs). However,…

Machine Learning · Computer Science 2024-08-30 Nu Hoang , Bao Duong , Thin Nguyen

Belief Propagation algorithms acting on Graphical Models of classical probability distributions, such as Markov Networks, Factor Graphs and Bayesian Networks, are amongst the most powerful known methods for deriving probabilistic inferences…

Quantum Physics · Physics 2009-11-13 Matthew Leifer , David Poulin

We analyze the complexity of learning directed acyclic graphical models from observational data in general settings without specific distributional assumptions. Our approach is information-theoretic and uses a local Markov boundary search…

Statistics Theory · Mathematics 2021-11-23 Ming Gao , Bryon Aragam

Graphs are expressive abstractions representing more effectively relationships in data and enabling data science tasks. They are also a widely adopted paradigm in causal inference focusing on causal directed acyclic graphs. Causal DAGs…

Databases · Computer Science 2024-12-19 Amedeo Pachera , Mattia Palmiotto , Angela Bonifati , Andrea Mauri

We propose a novel approach to perform approximate Bayesian inference in complex models such as Bayesian neural networks. The approach is more scalable to large data than Markov Chain Monte Carlo, it embraces more expressive models than…

Machine Learning · Statistics 2022-09-07 Joel Janek Dabrowski , Daniel Edward Pagendam

We describe a simple algorithm based on a Markov chain process to generate simply connected acyclic directed graphs over a fixed set of vertices. This algorithm is an extension of a previous one, designed to generate acyclic digraphs, non…

Discrete Mathematics · Computer Science 2007-05-23 Guy Melancon , Fabrice Philippe

Acyclic directed mixed graphs, also known as semi-Markov models represent the conditional independence structure induced on an observed margin by a DAG model with latent variables. In this paper we present a factorization criterion for…

Artificial Intelligence · Computer Science 2014-06-27 Thomas S. Richardson

This article introduces a spherical latent space model for social network analysis, embedding actors on a hypersphere rather than in Euclidean space as in standard latent space models. The spherical geometry facilitates the representation…

Methodology · Statistics 2025-08-25 Juan Sosa , Carlos Nosa

We introduce a taxonomy of interaction types and show that graphs are focal hypergraphs: every graph is canonically a focal hypergraph via its closed neighbourhood structure, and every graph dynamical model is a special case of the general…

Physics and Society · Physics 2026-03-05 Elkaïoum M. Moutuou

Acyclic digraphs are the underlying representation of Bayesian networks, a widely used class of probabilistic graphical models. Learning the underlying graph from data is a way of gaining insights about the structural properties of a…

Machine Learning · Statistics 2022-05-06 Jack Kuipers , Giusi Moffa

In graphical modelling, a bi-directed graph encodes marginal independences among random variables that are identified with the vertices of the graph. We show how to transform a bi-directed graph into a maximal ancestral graph that (i)…

Statistics Theory · Mathematics 2008-03-25 Mathias Drton , Thomas S. Richardson

Exponential random graph models are a class of widely used exponential family models for social networks. The topological structure of an observed network is modelled by the relative prevalence of a set of local sub-graph configurations…

Computation · Statistics 2013-01-21 Alberto Caimo , Nial Friel

We consider the problem of learning Bayesian network classifiers that maximize the marginover a set of classification variables. We find that this problem is harder for Bayesian networks than for undirected graphical models like maximum…

Machine Learning · Computer Science 2012-07-09 Yuhong Guo , Dana Wilkinson , Dale Schuurmans

In order to improve the resilience of computer infrastructure against cyber attacks and finding ways to mitigate their impact we need to understand their structure and dynamics. Here we propose a novel network-based influence spreading…

Social and Information Networks · Computer Science 2025-09-03 Vesa Kuikka , Lauri Pykälä , Tuomas Takko , Kimmo Kaski