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We consider the analysis of sets of categorical sequences consisting of piecewise homogeneous Markov segments. The sequences are assumed to be governed by a common underlying process with segments occurring in the same order for each…

Methodology · Statistics 2015-04-08 Petter Arnesen , Tracy Holsclaw , Padhraic Smyth

Graphical models are popular statistical tools which are used to represent dependent or causal complex systems. Statistically equivalent causal or directed graphical models are said to belong to a Markov equivalent class. It is of great…

Machine Learning · Statistics 2014-01-30 Yangbo He , Jinzhu Jia , Bin Yu

There are various measures to compute correlation in various conditions, but none of them can be used publicly, because each of them has abnormality in their calculations or behaviors. These abnormalities do not depend on genus of…

Quantum Physics · Physics 2018-10-25 Abolfathiyar Masoud , Entekhabi Sina

Exemplar-based image translation establishes dense correspondences between a conditional input and an exemplar (from two different domains) for leveraging detailed exemplar styles to achieve realistic image translation. Existing work builds…

Computer Vision and Pattern Recognition · Computer Science 2022-04-04 Fangneng Zhan , Yingchen Yu , Rongliang Wu , Jiahui Zhang , Shijian Lu , Changgong Zhang

With a sequence of regressions, one may generate joint probability distributions. One starts with a joint, marginal distribution of context variables having possibly a concentration graph structure and continues with an ordered sequence of…

Statistics Theory · Mathematics 2017-02-03 Kayvan Sadeghi , Nanny Wermuth

We obtain a perfect sampling characterization of weak ergodicity for backward products of finite stochastic matrices, and equivalently, simultaneous tail triviality of the corresponding nonhomogeneous Markov chains. Applying these ideas to…

Statistics Theory · Mathematics 2016-01-07 Nick Whiteley , Anthony Lee

We introduce a class of causal hidden quantum Markov models (cHQMMs) that reverse the usual order of hidden updates and emissions compared to conventional HQMMs. Using a simple qubit model with a rotating hidden state and sharp…

Mathematical Physics · Physics 2026-04-08 Abdessatar Souissi , Abdessatar Barhoumi

Deep sequence models are receiving significant interest in current machine learning research. By representing probability distributions that are fit to data using maximum likelihood estimation, such models can model data on general…

Systems and Control · Electrical Eng. & Systems 2024-09-09 Kristian Løvland , Bjarne Grimstad , Lars Struen Imsland

We provide a new approach for proving the indistinguishability of connected components of random one-or-two-ended oriented forests on unimodular random graphs. In particular, this approach leads to a new and simpler proof for the wired…

Probability · Mathematics 2026-05-18 Francois Baccelli , Ali Khezeli

Countable state Markov shifts are a natural generalization of the well-known subshifts of finite type. They are the subject of current research both for their own sake and as models for smooth dynamical systems. In this paper, we…

Dynamical Systems · Mathematics 2007-05-23 Mike M. Boyle , Jerome Buzzi , Ricardo Gomez

We address the dynamics of quantum correlations in continuous variable open systems and analyze the evolution of bipartite Gaussian states in independent noisy channels. In particular, upon introducing the notion of dynamical path through a…

Quantum Physics · Physics 2015-06-12 Andrea Cazzaniga , Sabrina Maniscalco , Stefano Olivares , Matteo G. A. Paris

We analyze a class of models for unequal crossover (UC) of sequences containing sections with repeated units that may differ in length. In these, the probability of an `imperfect' alignment, in which the shorter sequence has d units without…

Dynamical Systems · Mathematics 2007-05-23 Oliver Redner , Michael Baake

We consider Hidden Markov Models that emit sequences of observations that are drawn from continuous distributions. For example, such a model may emit a sequence of numbers, each of which is drawn from a uniform distribution, but the support…

Logic in Computer Science · Computer Science 2020-09-29 Oscar Darwin , Stefan Kiefer

Two sequentially Markov coalescent models (SMC and SMC') are available as tractable approximations to the ancestral recombination graph (ARG). We present a Markov process describing coalescence at two fixed points along a pair of sequences…

Populations and Evolution · Quantitative Biology 2015-03-06 Peter R. Wilton , Shai Carmi , Asger Hobolth

The computer revolution has been driven by a sustained increase of computational speed of approximately one order of magnitude (a factor of ten) every five years since about 1950. In natural sciences this has led to a continuous increase of…

Statistical Mechanics · Physics 2007-09-06 Bernd A. Berg

Predictive process analytics focuses on predicting future states, such as the outcome of running process instances. These techniques often use machine learning models or deep learning models (such as LSTM) to make such predictions. However,…

Machine Learning · Computer Science 2023-03-29 Olusanmi Hundogan , Xixi Lu , Yupei Du , Hajo A. Reijers

Molecular dynamics simulations have the potential to provide atomic-level detail and insight to important questions in chemical physics that cannot be observed in typical experiments. However, simply generating a long trajectory is…

Chemical Physics · Physics 2015-06-22 Christian R. Schwantes , Robert T. McGibbon , Vijay S. Pande

The method of 'coupling from the past' permits exact sampling from the invariant distribution of a Markov chain on a finite state space. The coupling is successful whenever the stochastic dynamics are such that there is coalescence of all…

Probability · Mathematics 2025-10-17 Geoffrey R. Grimmett , Mark Holmes

Importance sampling of trajectories has proved a uniquely successful strategy for exploring rare dynamical behaviors of complex systems in an unbiased way. Carrying out this sampling, however, requires an ability to propose changes to…

Statistical Mechanics · Physics 2015-07-01 Todd R. Gingrich , Phillip L. Geissler

Markov state models (MSMs) have been widely used to analyze computer simulations of various biomolecular systems. They can capture conformational transitions much slower than an average or maximal length of a single molecular dynamics (MD)…

Biomolecules · Quantitative Biology 2018-02-14 Anton V. Sinitskiy , Vijay S. Pande