Related papers: A Simple Sublinear-Time Algorithm for Counting Arb…
We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it. Most assembly algorithms utilize assembly graphs like the de Bruijn graph or the overlap…
We study the problem of counting the number of {\em isomorphic} copies of a given {\em template} graph, say $H$, in the input {\em base} graph, say $G$. In general, it is believed that polynomial time algorithms that solve this problem…
In this paper, we introduce a generalization of graphlets to heterogeneous networks called typed graphlets. Informally, typed graphlets are small typed induced subgraphs. Typed graphlets generalize graphlets to rich heterogeneous networks…
The problem of subgraph counting asks for the number of occurrences of a pattern graph $H$ as a subgraph of a host graph $G$ and is known to be computationally challenging: it is $\#W[1]$-hard even when $H$ is restricted to simple…
Suppose we wish to estimate $\#H$, the number of copies of some small graph $H$ in a large streaming graph $G$. There are many algorithms for this task when $H$ is a triangle, but just a few that apply to arbitrary $H$. Here we focus on one…
For a graph $G$, let $Z(G,\lambda)$ be the partition function of the monomer-dimer system defined by $\sum_k m_k(G)\lambda^k$, where $m_k(G)$ is the number of matchings of size $k$ in $G$. We consider graphs of bounded degree and develop a…
Many algorithms are designed to work well on average over inputs. When running such an algorithm on an arbitrary input, we must ask: Can we trust the algorithm on this input? We identify a new class of algorithmic problems addressing this,…
We study the widely used hierarchical agglomerative clustering (HAC) algorithm on edge-weighted graphs. We define an algorithmic framework for hierarchical agglomerative graph clustering that provides the first efficient $\tilde{O}(m)$ time…
Counting homomorphisms of a constant sized pattern graph $H$ in an input graph $G$ is a fundamental computational problem. There is a rich history of studying the complexity of this problem, under various constraints on the input $G$ and…
Estimating the number of triangles in graph streams using a limited amount of memory has become a popular topic in the last decade. Different variations of the problem have been studied, depending on whether the graph edges are provided in…
We consider the problem of counting the number of copies of a fixed graph $H$ within an input graph $G$. This is one of the most well-studied algorithmic graph problems, with many theoretical and practical applications. We focus on solving…
We study the following problem: given an integer $k \ge 3$ and a simple graph $G$, sample a connected induced $k$-node subgraph of $G$ uniformly at random. This is a fundamental graph mining primitive with applications in social network…
For a finite set $\mathcal{F}$ of graphs, the $\mathcal{F}$-Hitting problem aims to compute, for a given graph $G$ (taken from some graph class $\mathcal{G}$) of $n$ vertices (and $m$ edges) and a parameter $k\in\mathbb{N}$, a set $S$ of…
We present a new algorithm for approximating the number of triangles in a graph $G$ whose edges arrive as an arbitrary order stream. If $m$ is the number of edges in $G$, $T$ the number of triangles, $\Delta_E$ the maximum number of…
We consider the problem of finding a large clique in an Erd\H{o}s--R\'enyi random graph where we are allowed unbounded computational time but can only query a limited number of edges. Recall that the largest clique in $G \sim G(n,1/2)$ has…
We initiate a systematic study of algorithms that are both differentially private and run in sublinear time for several problems in which the goal is to estimate natural graph parameters. Our main result is a differentially-private…
We propose a universal approach to a range of enumeration problems in graphs. The key point is in contracting suitably chosen symmetric tensors placed at the vertices of a graph along the edges. In particular, this leads to an algorithm…
We investigate a fundamental vertex-deletion problem called (Induced) Subgraph Hitting: given a graph $G$ and a set $\mathcal{F}$ of forbidden graphs, the goal is to compute a minimum-sized set $S$ of vertices of $G$ such that $G-S$ does…
A well-known problem in data science and machine learning is {\em linear regression}, which is recently extended to dynamic graphs. Existing exact algorithms for updating the solution of dynamic graph regression require at least a linear…
In this work, we resolve the query complexity of global minimum cut problem for a graph by designing a randomized algorithm for approximating the size of minimum cut in a graph, where the graph can be accessed through local queries like…