Related papers: Sorting permutations with a transposition tree

We study two related probabilistic models of permutations and trees biased by their number of descents. Here, a descent in a permutation $\sigma$ is a pair of consecutive elements $\sigma(i), \sigma(i+1)$ such that $\sigma(i) >…

For a given permutation or set partition there is a natural way to assign a genus. Counting all permutations or partitions of a fixed genus according to cycle lengths or block sizes, respectively, is the main content of this article. After…

This paper tightens the best known analysis of Hein's 1989 algorithm to infer the topology of a weighted tree based on the lengths of paths between its leaves. It shows that the number of length queries required for a degree-$k$ tree of $n$…

A permutation graph is a graph whose edges are given by inversions of a permutation. We study the Abelian sandpile model (ASM) on such graphs. We exhibit a bijection between recurrent configurations of the ASM on permutation graphs and the…

The degree distribution of an ordered tree $T$ with $n$ nodes is $\vec{n} = (n_0,\ldots,n_{n-1})$, where $n_i$ is the number of nodes in $T$ with $i$ children. Let $\mathcal{N}(\vec{n})$ be the number of trees with degree distribution…

The order $O_n(\sigma)$ of a permutation $\sigma$ of $n$ objects is the smallest integer $k \geq 1$ such that the $k$-th iterate of $\sigma$ gives the identity. A remarkable result about the order of a uniformly chosen permutation is due to…

We study a model of random weighted uniform spanning trees on the complete graph with $n$ vertices, where each edge is assigned a weight of $n^{1+\gamma}$ with probability $1/n$ and $1$ otherwise. Whenever $\gamma$ is large enough, we prove…

In this paper we investigate an extremal problem on binary phylogenetic trees. Given two such trees $T_1$ and $T_2$, both with leaf-set ${1,2,...,n}$, we are interested in the size of the largest subset $S \subseteq {1,2,...,n}$ of leaves…

We first give two methods based on the representation theory of symmetric groups to study the largest size $P(n,d)$ of permutation codes of length $n$ i.e. subsets of the set $S_n$ all permutations on $\{1,\dots,n\}$ with the minimum…

\begin{abstract} Greedy permutations, also known as Gonzalez Orderings or Farthest Point Traversals are a standard way to approximate $k$-center clustering and have many applications in sampling and approximating metric spaces. A greedy…

We study sorting by queues that can rearrange their content by applying permutations from a predefined set. These new sorting devices are called shuffle queues and we investigate those of them corresponding to sets of permutations defining…

We study subsets $T$ consisting of some transpositions $(i,j)$ of the symmetric group $S_n$ on $\{1,\dots,n\}$ such that the Cayley graph $\Gamma_T:=Cay(S_n,T)$ is an integral graph, i.e., all eigenvalues of an adjacency matrix of…

Let $S_{\rm lcm}(n)$ denote the set of permutations $\pi$ of $[n]=\{1,2,\dots,n\}$ such that ${\rm lcm}[j,\pi(j)]\le n$ for each $j\in[n]$. Further, let $S_{\rm div}(n)$ denote the number of permutations $\pi$ of $[n]$ such that…

Motivation coming from the study of affine Weyl groups, a structure of ranked poset is defined on the set of circular permutations in $S_n$ (that is, $n$-cycles). It is isomorphic to the poset of so-called admitted vectors, and to an…

Given a finite group $G$ and its representation $\rho$, the corresponding McKay graph is a graph $\Gamma(G,\rho)$ whose vertices are the irreducible representations of $G$; the number of edges between two vertices $\pi,\tau$ of…

A transversal in a rooted tree is any set of nodes that meets every path from the root to a leaf. We let c(T,k) denote the number of transversals of size k in a rooted tree T. We define a partial order on the set of all rooted trees with n…

We revisit the classical problem of computing the \emph{contour tree} of a scalar field $f:\mathbb{M} \to \mathbb{R}$, where $\mathbb{M}$ is a triangulated simplicial mesh in $\mathbb{R}^d$. The contour tree is a fundamental topological…

Phylogenetically decisive collections of taxon sets have the property that if trees are chosen for each of their elements, as long as these trees are compatible, the resulting supertree is unique. This means that as long as the trees…

A set is an unordered collection of unique elements--and yet many machine learning models that generate sets impose an implicit or explicit ordering. Since model performance can depend on the choice of order, any particular ordering can…

Introgression is an evolutionary process in which genes or other types of genetic material are introduced into a genome. It is an important evolutionary process that can, for example, play a fundamental role in speciation. Recently the…