English
Related papers

Related papers: Algorithmic complexity in computational biology: b…

200 papers

Would it be possible to explain the emergence of new computational ideas using the computation itself? Would it be feasible to describe the discovery process of new algorithmic solutions using only mathematics? This study is the first…

Quantum optimization algorithms hold the promise of solving classically hard, discrete optimization problems in practice. The requirement of encoding such problems in a Hamiltonian realized with a finite -- and currently small -- number of…

Quantum Physics · Physics 2023-07-10 Yifeng Rocky Zhu , David Joseph , Cong Ling , Florian Mintert

Query complexity is a model of computation in which we have to compute a function $f(x_1, \ldots, x_N)$ of variables $x_i$ which can be accessed via queries. The complexity of an algorithm is measured by the number of queries that it makes.…

Quantum Physics · Physics 2017-12-19 Andris Ambainis

The complexity of cellular automata is traditionally measured by their computational capacity. However, it is difficult to choose a challenging set of computational tasks suitable for the parallel nature of such systems. We study the…

Neural and Evolutionary Computing · Computer Science 2021-08-03 Barbora Hudcová , Tomáš Mikolov

This paper establishes some of the fundamental barriers in the theory of computations and finally settles the long-standing computational spectral problem. That is to determine the existence of algorithms that can compute spectra…

Computational Complexity · Computer Science 2020-06-16 Jonathan Ben-Artzi , Matthew J. Colbrook , Anders C. Hansen , Olavi Nevanlinna , Markus Seidel

The anticipated applications of quantum computers span across science and industry, ranging from quantum chemistry and many-body physics to optimization, finance, and machine learning. Proposed quantum solutions in these areas typically…

Query complexity measures the amount of information an algorithm needs about a problem to compute a solution. On a quantum computer there are different realizations of a query and we will show that these are not always equivalent. Our…

Quantum Physics · Physics 2007-05-23 Arvid J. Bessen

An astonishingly diverse biomolecular circuitry orchestrates the functioning machinery underlying every living cell. These biomolecules and their circuits have been engineered not only for various industrial applications but also to perform…

Biomolecules · Quantitative Biology 2021-02-15 Sahana Gangadharan , Karthik Raman

Computational reproducibility is a growing problem that has been extensively studied among computational researchers and within the signal processing and machine learning research community. However, with the changing landscape of signal…

Signal Processing · Electrical Eng. & Systems 2022-02-16 Joseph Shenouda , Waheed U. Bajwa

Atomic congestion games are a classic topic in network design, routing, and algorithmic game theory, and are capable of modeling congestion and flow optimization tasks in various application areas. While both the price of anarchy for such…

Computer Science and Game Theory · Computer Science 2024-10-23 Cornelius Brand , Robert Ganian , Subrahmanyam Kalyanasundaram , Fionn Mc Inerney

Given a reference computer, Kolmogorov complexity is a well defined function on all binary strings. In the standard approach, however, only the asymptotic properties of such functions are considered because they do not depend on the…

Machine Learning · Computer Science 2007-05-23 Andrei N. Soklakov

In many high-dimensional problems,polynomial-time algorithms fall short of achieving the statistical limits attainable without computational constraints. A powerful approach to probe the limits of polynomial-time algorithms is to study the…

Statistics Theory · Mathematics 2025-07-11 Bertrand Even , Christophe Giraud , Nicolas Verzelen

Depth is a complexity measure for natural systems of the kind studied in statistical physics and is defined in terms of computational complexity. Depth quantifies the length of the shortest parallel computation required to construct a…

Popular Physics · Physics 2011-11-14 Jon Machta

A general notion of information-related complexity applicable to both natural and man-made systems is proposed. The overall approach is to explicitly consider a rational agent performing a certain task with a quantifiable degree of success.…

Data Analysis, Statistics and Probability · Physics 2013-01-18 Eugene Perevalov , David Grace

We investigate an approach to matroid complexity that involves describing a matroid via a list of independent sets, bases, circuits, or some other family of subsets of the ground set. The computational complexity of algorithmic problems…

Combinatorics · Mathematics 2007-09-10 Dillon Mayhew

Optimization of complex functions, such as the output of computer simulators, is a difficult task that has received much attention in the literature. A less studied problem is that of optimization under unknown constraints, i.e., when the…

Methodology · Statistics 2010-07-06 Robert B. Gramacy , Herbert K. H. Lee

What is computable with limited resources? How can we verify the correctness of computations? How to measure computational power with precision? Despite the immense scientific and engineering progress in computing, we still have only…

Other Computer Science · Computer Science 2016-10-20 Attila Egri-Nagy

We initiate a study of algorithms with a focus on the computational complexity of individual elements, and introduce the fragile complexity of comparison-based algorithms as the maximal number of comparisons any individual element takes…

Data Structures and Algorithms · Computer Science 2019-09-04 Peyman Afshani , Rolf Fagerberg , David Hammer , Riko Jacob , Irina Kostitsyna , Ulrich Meyer , Manuel Penschuck , Nodari Sitchinava

Although reproducibility is a core tenet of the scientific method, it remains challenging to reproduce many results. Surprisingly, this also holds true for computational results in domains such as systems biology where there have been…

Quantitative Methods · Quantitative Biology 2021-04-13 Michael L. Blinov , John H. Gennari , Jonathan R. Karr , Ion I. Moraru , David P. Nickerson , Herbert M. Sauro

We develop a notion of computability and complexity of functions over the reals, which seems to be very natural when one tries to determine just how "difficult" a certain function is. This notion can be viewed as an extension of both BSS…

Computational Complexity · Computer Science 2007-05-23 Mark Braverman
‹ Prev 1 4 5 6 7 8 10 Next ›