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Structural information about protein-protein interactions, often missing at the interactome scale, is important for mechanistic understanding of cells and rational discovery of therapeutics. Protein docking provides a computational…

Biomolecules · Quantitative Biology 2020-12-17 Yue Cao , Yang Shen

Graph Neural Networks (GNNs) have been widely used for various learning tasks, ranging from node classification to link prediction. They have demonstrated excellent performance in multiple domains involving graph-structured data. However,…

Machine Learning · Computer Science 2026-03-19 Steven E. Wilson , Sina Khanmohammadi

Recently, graph convolutional network (GCN) has been widely used for semi-supervised classification and deep feature representation on graph-structured data. However, existing GCN generally fails to consider the local invariance constraint…

Computer Vision and Pattern Recognition · Computer Science 2018-09-27 Bo Jiang , Doudou Lin

Graph Convolutional Networks (GCNs) are powerful models for node representation learning tasks. However, the node representation in existing GCN models is usually generated by performing recursive neighborhood aggregation across multiple…

Machine Learning · Computer Science 2021-05-11 Hao Chen , Zengde Deng , Yue Xu , Zhoujun Li

In this paper, we propose a novel embedding model, named ConvKB, for knowledge base completion. Our model ConvKB advances state-of-the-art models by employing a convolutional neural network, so that it can capture global relationships and…

Computation and Language · Computer Science 2018-08-14 Dai Quoc Nguyen , Tu Dinh Nguyen , Dat Quoc Nguyen , Dinh Phung

Machine learning techniques for road networks hold the potential to facilitate many important transportation applications. Graph Convolutional Networks (GCNs) are neural networks that are capable of leveraging the structure of a road…

Machine Learning · Computer Science 2020-07-23 Tobias Skovgaard Jepsen , Christian S. Jensen , Thomas Dyhre Nielsen

Graph Convolutional Networks (GCNs) have received increasing attention in the machine learning community for effectively leveraging both the content features of nodes and the linkage patterns across graphs in various applications. As…

Machine Learning · Computer Science 2021-01-01 Donghan Yu , Ruohong Zhang , Zhengbao Jiang , Yuexin Wu , Yiming Yang

Knowledge graphs are graphical representations of large databases of facts, which typically suffer from incompleteness. Inferring missing relations (links) between entities (nodes) is the task of link prediction. A recent state-of-the-art…

Machine Learning · Computer Science 2019-09-12 Ivana Balažević , Carl Allen , Timothy M. Hospedales

Graph Convolutional Neural Networks (GCNNs) are generalizations of CNNs to graph-structured data, in which convolution is guided by the graph topology. In many cases where graphs are unavailable, existing methods manually construct graphs…

Machine Learning · Computer Science 2019-09-17 Xiang Gao , Wei Hu , Zongming Guo

Recently, graph convolutional networks (GCNs) have been developed to explore spatial relationship between pixels, achieving better classification performance of hyperspectral images (HSIs). However, these methods fail to sufficiently…

Computer Vision and Pattern Recognition · Computer Science 2022-04-13 Jin-Yu Yang , Heng-Chao Li , Wen-Shuai Hu , Lei Pan , Qian Du

Graph neural networks (GNNs) have revolutionized the field of machine learning on non-Euclidean data such as graphs and networks. GNNs effectively implement node representation learning through neighborhood aggregation and achieve…

Machine Learning · Computer Science 2024-04-30 Zehao Dong , Muhan Zhang , Yixin Chen

Graph convolutional networks (GCN) have recently demonstrated their potential in analyzing non-grid structure data that can be represented as graphs. The core idea is to encode the local topology of a graph, via convolutions, into the…

Machine Learning · Computer Science 2021-01-12 Yiding Yang , Xinchao Wang , Mingli Song , Junsong Yuan , Dacheng Tao

Graph Convolutional Networks (GCNs) have made significant advances in semi-supervised learning, especially for classification tasks. However, existing GCN based methods have two main drawbacks. First, to increase the receptive field and…

Computer Vision and Pattern Recognition · Computer Science 2019-11-13 Qikui Zhu , Bo Du , Pingkun Yan

Recommendation models utilizing Graph Convolutional Networks (GCNs) have achieved state-of-the-art performance, as they can integrate both the node information and the topological structure of the user-item interaction graph. However, these…

Information Retrieval · Computer Science 2022-11-28 Xin Zhou , Donghui Lin , Yong Liu , Chunyan Miao

Document-level relation extraction with graph neural networks faces a fundamental graph construction gap between training and inference - the golden graph structure only available during training, which causes that most methods adopt…

Computation and Language · Computer Science 2022-10-11 Ji Qi , Bin Xu , Kaisheng Zeng , Jinxin Liu , Jifan Yu , Qi Gao , Juanzi Li , Lei Hou

Automatic emotion recognition based on multichannel Electroencephalography (EEG) holds great potential in advancing human-computer interaction. However, several significant challenges persist in existing research on algorithmic emotion…

Machine Learning · Computer Science 2023-10-24 Hongxiang Gao , Xiangyao Wang , Zhenghua Chen , Min Wu , Zhipeng Cai , Lulu Zhao , Jianqing Li , Chengyu Liu

This paper proposes a new Quantum Spatial Graph Convolutional Neural Network (QSGCNN) model that can directly learn a classification function for graphs of arbitrary sizes. Unlike state-of-the-art Graph Convolutional Neural Network (GCNN)…

Machine Learning · Computer Science 2023-04-04 Lu Bai , Yuhang Jiao , Luca Rossi , Lixin Cui , Jian Cheng , Edwin R. Hancock

Graph convolution (GConv) is a widely used technique that has been demonstrated to be extremely effective for graph learning applications, most notably node categorization. On the other hand, many GConv-based models do not quantify the…

Machine Learning · Computer Science 2022-07-27 Zhiqian Chen , Zonghan Zhang

In skeleton-based action recognition, graph convolutional networks (GCNs), which model the human body skeletons as spatiotemporal graphs, have achieved remarkable performance. However, in existing GCN-based methods, the topology of the…

Computer Vision and Pattern Recognition · Computer Science 2019-07-11 Lei Shi , Yifan Zhang , Jian Cheng , Hanqing Lu

Predicting the future trajectory of surrounding vehicles in a randomly varying traffic level is one of the most challenging problems in developing an autonomous vehicle. Since there is no pre-defined number of interacting vehicles…

Computer Vision and Pattern Recognition · Computer Science 2020-03-02 Hyeongseok Jeon , Junwon Choi , Dongsuk Kum