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In the Shortest Superstring problem, we are given a set of strings and we are asking for a common superstring, which has the minimum number of characters. The Shortest Superstring problem is NP-hard and several constant-factor approximation…

Data Structures and Algorithms · Computer Science 2021-11-09 Matthias Englert , Nicolaos Matsakis , Pavel Veselý

Exact pattern matching in labeled graphs is the problem of searching paths of a graph $G=(V,E)$ that spell the same string as the pattern $P[1..m]$. This basic problem can be found at the heart of more complex operations on variation graphs…

Computational Complexity · Computer Science 2020-06-04 Massimo Equi , Roberto Grossi , Veli Mäkinen

Graph edit distance (GED) is an important similarity measure adopted in a similarity-based analysis between two graphs, and computing GED is a primitive operator in graph database analysis. Partially due to the NP-hardness, the existing…

Databases · Computer Science 2017-10-03 Lijun Chang , Xing Feng , Xuemin Lin , Lu Qin , Wenjie Zhang

In this article, we propose tree edit distance with variables, which is an extension of the tree edit distance to handle trees with variables and has a potential application to measuring the similarity between mathematical formulas,…

Data Structures and Algorithms · Computer Science 2021-05-12 Tatsuya Akutsu , Tomoya Mori , Naotoshi Nakamura , Satoshi Kozawa , Yuhei Ueno , Thomas N. Sato

This paper is on the normal approximation of singular subspaces when the noise matrix has i.i.d. entries. Our contributions are three-fold. First, we derive an explicit representation formula of the empirical spectral projectors. The…

Statistics Theory · Mathematics 2019-07-29 Dong Xia

A Dyck sequence is a sequence of opening and closing parentheses (of various types) that is balanced. The Dyck edit distance of a given sequence of parentheses $S$ is the smallest number of edit operations (insertions, deletions, and…

Data Structures and Algorithms · Computer Science 2022-08-23 Dvir Fried , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat , Tatiana Starikovskaya

An edit distance is a measure of the minimum cost sequence of edit operations to transform one structure into another. Edit distance is most commonly encountered within the context of strings, where Wagner and Fischer's string edit distance…

Discrete Mathematics · Computer Science 2020-05-21 Vincent A. Cicirello

We consider the classical tree edit distance between ordered labeled trees, which is defined as the minimum-cost sequence of node edit operations that transform one tree into another. The state-of-the-art solutions for the tree edit…

Databases · Computer Science 2012-01-04 Mateusz Pawlik , Nikolaus Augsten

Pseudospectral approximation provides a means to approximate the dynamics of delay differential equations (DDE) by ordinary differential equations (ODE). This article develops a computer-aided algorithm to determine the distance between the…

Dynamical Systems · Mathematics 2024-05-14 Shane Kepley , Babette A. J. de Wolff

An exponent-string is an extension of traditional strings that can incorporate real-numbered exponents, indicating the quantity of characters. This novel representation overcomes the limitations of traditional discrete string by enabling…

Formal Languages and Automata Theory · Computer Science 2024-08-26 Ingyu Baek

The edit distance between two graphs on the same vertex set is defined to be size of the symmetric difference of their edge sets. The edit distance function of a hereditary property, $\mathcal{H}$, is a function of $p$ and measures,…

Combinatorics · Mathematics 2011-02-22 Ryan Martin , Tracy McKay

The approximation of a discrete probability distribution $\mathbf{t}$ by an $M$-type distribution $\mathbf{p}$ is considered. The approximation error is measured by the informational divergence $\mathbb{D}(\mathbf{t}\Vert\mathbf{p})$, which…

Information Theory · Computer Science 2016-07-28 Bernhard C. Geiger , Georg Böcherer

String Edit Distance is a more-than-classical problem whose behavior in the dynamic setting, where the strings are updated over time, is well studied. A single-character substitution, insertion, or deletion can be processed in time…

Data Structures and Algorithms · Computer Science 2025-11-18 Bingbing Hu , Jakob Nogler , Barna Saha

String edit distances have been used for decades in applications ranging from spelling correction and web search suggestions to DNA analysis. Most string edit distances are variations of the Levenshtein distance and consider only…

Genomics · Quantitative Biology 2022-05-12 Taylor Petty , Jan Hannig , Tunde I Huszar , Hari Iyer

Approximating the length of the longest increasing sequence (LIS) of an array is a well-studied problem. We study this problem in the data stream model, where the algorithm is allowed to make a single left-to-right pass through the array…

Data Structures and Algorithms · Computer Science 2013-04-16 Michael Saks , C. Seshadhri

Many modern data-intensive computational problems either require, or benefit from distance or similarity data that adhere to a metric. The algorithms run faster or have better performance guarantees. Unfortunately, in real applications, the…

Machine Learning · Statistics 2017-10-31 Anna C. Gilbert , Lalit Jain

The graph edit distance (GED) measures the dissimilarity between two graphs as the minimal cost of a sequence of elementary operations transforming one graph into another. This measure is fundamental in many areas such as structural pattern…

Data Structures and Algorithms · Computer Science 2019-11-27 Nicolas Boria , David B. Blumenthal , Sébastien Bougleux , Luc Brun

There are efficient dynamic programming solutions to the computation of the Edit Distance from $S\in[1..\sigma]^n$ to $T\in[1..\sigma]^m$, for many natural subsets of edit operations, typically in time within $O(nm)$ in the worst-case over…

Information Retrieval · Computer Science 2018-06-13 Jérémy Barbay , Andrés Olivares

Subgraph similarity search, one of the core problems in graph search, concerns whether a target graph approximately contains a query graph. The problem is recently touched by neural methods. However, current neural methods do not consider…

Machine Learning · Computer Science 2022-10-20 Linfeng Liu , Xu Han , Dawei Zhou , Li-Ping Liu

Political scientists often find themselves tracking amendments to political texts. As different actors weigh in, texts change as they are drafted and redrafted, reflecting political preferences and power. This study provides a novel…

Computation and Language · Computer Science 2016-08-24 Henrik Hermansson , James P. Cross